PDB entry 6okb

View 6okb on RCSB PDB site
Description: prohead 2 of the phage t5
Deposited on 2019-04-12, released 2019-10-02
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: EM
Resolution: 6.7 Å
R-factor: N/A
AEROSPACI score: -0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: Major capsid protein
    Species: ESCHERICHIA PHAGE T5 [TaxId:10726]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6okbA (A:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbA (A:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6okbB (B:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbB (B:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6okbC (C:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbC (C:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6okbD (D:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbD (D:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6okbE (E:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbE (E:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6okbF (F:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbF (F:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6okbG (G:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbG (G:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6okbH (H:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbH (H:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6okbI (I:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbI (I:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6okbJ (J:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbJ (J:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'K':
    Sequence, based on SEQRES records:
    >6okbK (K:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbK (K:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6okbL (L:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbL (L:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

  • Chain 'M':
    Sequence, based on SEQRES records:
    >6okbM (M:)
    avnqsssvevssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatw
    vaastygtdtttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieah
    avsieeafmtgdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhgl
    klsklvlivsmdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakans
    aefavivykdnfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas
    

    Sequence, based on observed residues (ATOM records):
    >6okbM (M:)
    ssesyetifsqriirdlqkelvvgalfeelpmsskiltmlvepdagkatwvaastygtdt
    ttgeevkgalkeihfstyklaaksfitdeteedaifsllpllrkrlieahavsieeafmt
    gdgsgkpkglltlasedsakvvteakadgsvlvtaktisklrrklgrhglklsklvlivs
    mdayydlledeewqdvaqvgndsvklqgqvgriyglpvvvseyfpakansaefavivykd
    nfvmprqravtvererqagkqrdayyvtqrvnlqryfangvvsgtyaas