PDB entry 6ojy

View 6ojy on RCSB PDB site
Description: methylated pilt4 from geobacter metallireducens bound to sulfate: c3ocococ conformation
Deposited on 2019-04-12, released 2019-11-20
The last revision was dated 2020-01-08, with a file datestamp of 2020-01-03.
Experiment type: XRAY
Resolution: 3.3 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q39VU6 (20-End)
      • expression tag (15-19)
  • Chain 'C':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q39VU6 (20-End)
      • expression tag (18-19)
  • Chain 'D':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ojyA (A:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6ojyA (A:)
anmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqk
hkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelae
kprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevga
dtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinri
vdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkih
qiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmltsg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ojyB (B:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6ojyB (B:)
prgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysi
lteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppv
vrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvn
qrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsav
qtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnli
redkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqm

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ojyC (C:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6ojyC (C:)
shmanmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilte
qqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvre
laekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqre
vgadtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqti
nrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnlired
kihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlts

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ojyD (D:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6ojyD (D:)
nmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqkh
kfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelaek
prglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevgad
tksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinriv
dvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkihq
iysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmltsg

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6ojyE (E:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6ojyE (E:)
anmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqk
hkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelae
kprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevga
dtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinri
vdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkih
qiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmltsgvrp

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6ojyF (F:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6ojyF (F:)
manmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqq
khkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrela
ekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevg
adtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinr
ivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredki
hqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlt