PDB entry 6ojq

View 6ojq on RCSB PDB site
Description: monomeric kinesin-1 motor domain in no-nucleotide state bound to gmpcpp-stabilized microtubule
Deposited on 2019-04-12, released 2020-04-15
The last revision was dated 2020-04-15, with a file datestamp of 2020-04-10.
Experiment type: EM
Resolution: 3.67 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tubulin alpha-1B chain
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Tubulin beta-2B chain
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6B856 (0-425)
      • conflict (54)
      • conflict (169)
      • conflict (295)
      • conflict (315)
  • Chain 'K':
    Compound: kinesin-1 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Gene: KIF5B, KNS, KNS1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P33176 (0-316)
      • conflict (57)
      • conflict (160)
      • conflict (166)
      • conflict (286)
  • Heterogens: G2P, MG, GTP

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ojqA (A:)
mrecisihvgqagvqignacwelyclehgiqpdgqmpsdktigggddsfntffsetgagk
hvpravfvdleptvidevrtgtyrqlfhpeqlitgkedaannyarghytigkeiidlvld
rirkladqctglqgflvfhsfgggtgsgftsllmerlsvdygkksklefsiypapqvsta
vvepynsiltthttlehsdcafmvdneaiydicrrnldierptytnlnrlisqivssita
slrfdgalnvdltefqtnlvpyprihfplatyapvisaekayheqlsvaeitnacfepan
qmvkcdprhgkymaccllyrgdvvpkdvnaaiatiktkrsiqfvdwcptgfkvginyqpp
tvvpggdlakvqravcmlsnttaiaeawarldhkfdlmyakrafvhwyvgegmeegefse
aredmaalekdyeevgv

    Sequence, based on observed residues (ATOM records):
    >6ojqA (A:)
mrecisihvgqagvqignacwelyclehgiqpdgqmpdsfntffsetgagkhvpravfvd
leptvidevrtgtyrqlfhpeqlitgkedaannyarghytigkeiidlvldrirkladqc
tglqgflvfhsfgggtgsgftsllmerlsvdygkksklefsiypapqvstavvepynsil
tthttlehsdcafmvdneaiydicrrnldierptytnlnrlisqivssitaslrfdgaln
vdltefqtnlvpyprihfplatyapvisaekayheqlsvaeitnacfepanqmvkcdprh
gkymaccllyrgdvvpkdvnaaiatiktkrsiqfvdwcptgfkvginyqpptvvpggdla
kvqravcmlsnttaiaeawarldhkfdlmyakrafvhwyvgegmeegefsearedmaale
kdyeevgv

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6ojqB (B:)
mreivhiqagqcgnqigakfwevisdehgidptgsyhgdsdlqlerinvyyneaagnkyv
prailvdlepgtmdsvrsgpfgqifrpdnfvfgqsgagnnwakghytegaelvdsvldvv
rkesescdclqgfqlthslgggtgsgmgtlliskireeypdrimntfsvvpspkvsdtvv
epynatlsvhqlventdetycidnealydicfrtlklttptygdlnhlvsatmsgvttcl
rfpgqlnadlrklavnmvpfprlhffmpgfapltsrgsqqyraltvpeltqqmfdaknmm
aacdprhgryltvaavfrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprg
lkmsatfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvs
eyqqyq

  • Chain 'K':
    Sequence, based on SEQRES records:
    >6ojqK (K:)
nikvmcrfrplnesevnrgdkyiakfqgedtvviaskpyafdrvfqsstsqeqvyndaak
kivkdvlegyngtifaygqtssgkthtmegklhdpegmgiiprivqdifnyiysmdenle
fhikvsyfeiyldkirdlldvsktnlsvhedknrvpyvkgaterfvsspdevmdtidegk
snrhvavtnmnehssrshsiflinvkqentqteqklsgklylvdlagsekvsktgaegav
ldeakninkslsalgnvisalaegstyvpyrdskmtrilqdslggnarttiviccspssy
nesetkstllfgqrakt

    Sequence, based on observed residues (ATOM records):
    >6ojqK (K:)
nikvmcrfrplnesevnrgdkyiakfqgedtvviaskpyafdrvfqsstsqeqvyndaak
kivkdvlegyngtifaygqtssgkthtmegklhdpegmgiiprivqdifnyiysmdenle
fhikvsyfeiyldkirdlldvsktnlsvhedknrvpyvkgaterfvsspdevmdtidegk
snrhvassrshsiflinvkqentqteqklsgklylvdlagsekvsktgaegavldeakni
nkslsalgnvisalaegstyvpyrdskmtrilqdslggnarttiviccspssynesetks
tllfgqrakt