PDB entry 6ojm

View 6ojm on RCSB PDB site
Description: Crystal structure of 1,4-dihydroxy-2-naphthoyl-CoA synthase Elizabethkingia anophelis NUHP1
Class: lyase
Keywords: SSGCID, Structural Genomics, DHNA-CoA synthase, Seattle Structural Genomics Center for Infectious Disease, LYASE
Deposited on 2019-04-11, released 2019-05-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-05-08, with a file datestamp of 2019-05-03.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: menB, BD94_2634
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ojma_
  • Chain 'B':
    Compound: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: menB, BD94_2634
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ojmb_
  • Chain 'C':
    Compound: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: menB, BD94_2634
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ojmc_
  • Chain 'D':
    Compound: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: menB, BD94_2634
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ojmd_
  • Chain 'E':
    Compound: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: menB, BD94_2634
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ojme_
  • Chain 'F':
    Compound: 1,4-Dihydroxy-2-naphthoyl-CoA synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: menB, BD94_2634
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ojmf_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ojmA (A:)
mahhhhhhmiewktakeyeditykkcngvariafnrpeirnafrpkttselydafydaye
dpsigvvllsgegpspkdggwafcsggdqkarghqgyvgedgrhrlnilevqrlirfmpk
vviavvpgwavggghslhvvcdltlaskehaifkqtdadvtsfdggygsaylakmvgqkk
areifflgrnysaqeafemgmvnkvvphaeledtayewaqeilaksptsirmlkfamnlt
ddgmvgqqvfageatrlaymtdeakegrnaflekrkpdfgedqwis

    Sequence, based on observed residues (ATOM records): (download) 
    >6ojmA (A:)
miewktakeyeditykkcngvariafnrpeirnafrpkttselydafydayedpsigvvl
lsgegpspkdggwafcsggdqkahrlnilevqrlirfmpkvviavvpgwavggghslhvv
cdltlaskehaifkqtdadvtsfdggygsaylakmvgqkkareifflgrnysaqeafemg
mvnkvvphaeledtayewaqeilaksptsirmlkfamnltddgmvgqqvfageatrlaym
tdeakegrnaflekrkpdfgedqwis

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6ojmB (B:)
mahhhhhhmiewktakeyeditykkcngvariafnrpeirnafrpkttselydafydaye
dpsigvvllsgegpspkdggwafcsggdqkarghqgyvgedgrhrlnilevqrlirfmpk
vviavvpgwavggghslhvvcdltlaskehaifkqtdadvtsfdggygsaylakmvgqkk
areifflgrnysaqeafemgmvnkvvphaeledtayewaqeilaksptsirmlkfamnlt
ddgmvgqqvfageatrlaymtdeakegrnaflekrkpdfgedqwis

    Sequence, based on observed residues (ATOM records): (download) 
    >6ojmB (B:)
miewktakeyeditykkcngvariafnrpeirnafrpkttselydafydayedpsigvvl
lsgegpspkdggwafcsggdqkarghqgyvgedgrhrlnilevqrlirfmpkvviavvpg
wavggghslhvvcdltlaskehaifkqtdadvtsfdggygsaylakmvgqkkareifflg
rnysaqeafemgmvnkvvphaeledtayewaqeilaksptsirmlkfamnltddgmvgqq
vfageatrlaymtdeakegrnaflekrkpdfgedqwis

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6ojmC (C:)
mahhhhhhmiewktakeyeditykkcngvariafnrpeirnafrpkttselydafydaye
dpsigvvllsgegpspkdggwafcsggdqkarghqgyvgedgrhrlnilevqrlirfmpk
vviavvpgwavggghslhvvcdltlaskehaifkqtdadvtsfdggygsaylakmvgqkk
areifflgrnysaqeafemgmvnkvvphaeledtayewaqeilaksptsirmlkfamnlt
ddgmvgqqvfageatrlaymtdeakegrnaflekrkpdfgedqwis

    Sequence, based on observed residues (ATOM records): (download) 
    >6ojmC (C:)
miewktakeyeditykkcngvariafnrpeirnafrpkttselydafydayedpsigvvl
lsgegpspkdggwafcsggdqkahrlnilevqrlirfmpkvviavvpgwavggghslhvv
cdltlaskehaifkqtdadvtsfdggygsaylakmvgqkkareifflgrnysaqeafemg
mvnkvvphaeledtayewaqeilaksptsirmlkfamnltddgmvgqqvfageatrlaym
tdeakegrnaflekrkpdfgedqwis

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6ojmD (D:)
mahhhhhhmiewktakeyeditykkcngvariafnrpeirnafrpkttselydafydaye
dpsigvvllsgegpspkdggwafcsggdqkarghqgyvgedgrhrlnilevqrlirfmpk
vviavvpgwavggghslhvvcdltlaskehaifkqtdadvtsfdggygsaylakmvgqkk
areifflgrnysaqeafemgmvnkvvphaeledtayewaqeilaksptsirmlkfamnlt
ddgmvgqqvfageatrlaymtdeakegrnaflekrkpdfgedqwis

    Sequence, based on observed residues (ATOM records): (download) 
    >6ojmD (D:)
miewktakeyeditykkcngvariafnrpeirnafrpkttselydafydayedpsigvvl
lsgegpspkdggwafcsggdqkanilevqrlirfmpkvviavvpgwavggghslhvvcdl
tlaskehaifkqtdadvtsfdggygsaylakmvgqkkareifflgrnysaqeafemgmvn
kvvphaeledtayewaqeilaksptsirmlkfamnltddgmvgqqvfageatrlaymtde
akegrnaflekrkpdfgedqwis

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6ojmE (E:)
mahhhhhhmiewktakeyeditykkcngvariafnrpeirnafrpkttselydafydaye
dpsigvvllsgegpspkdggwafcsggdqkarghqgyvgedgrhrlnilevqrlirfmpk
vviavvpgwavggghslhvvcdltlaskehaifkqtdadvtsfdggygsaylakmvgqkk
areifflgrnysaqeafemgmvnkvvphaeledtayewaqeilaksptsirmlkfamnlt
ddgmvgqqvfageatrlaymtdeakegrnaflekrkpdfgedqwis

    Sequence, based on observed residues (ATOM records): (download) 
    >6ojmE (E:)
miewktakeyeditykkcngvariafnrpeirnafrpkttselydafydayedpsigvvl
lsgegpspkdggwafcsggdqkhrlnilevqrlirfmpkvviavvpgwavggghslhvvc
dltlaskehaifkqtdadvtsfdggygsaylakmvgqkkareifflgrnysaqeafemgm
vnkvvphaeledtayewaqeilaksptsirmlkfamnltddgmvgqqvfageatrlaymt
deakegrnaflekrkpdfgedqwis

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6ojmF (F:)
mahhhhhhmiewktakeyeditykkcngvariafnrpeirnafrpkttselydafydaye
dpsigvvllsgegpspkdggwafcsggdqkarghqgyvgedgrhrlnilevqrlirfmpk
vviavvpgwavggghslhvvcdltlaskehaifkqtdadvtsfdggygsaylakmvgqkk
areifflgrnysaqeafemgmvnkvvphaeledtayewaqeilaksptsirmlkfamnlt
ddgmvgqqvfageatrlaymtdeakegrnaflekrkpdfgedqwis

    Sequence, based on observed residues (ATOM records): (download) 
    >6ojmF (F:)
miewktakeyeditykkcngvariafnrpeirnafrpkttselydafydayedpsigvvl
lsgegpspkdggwafcsggdqkarghqgyvgedgrhrlnilevqrlirfmpkvviavvpg
wavggghslhvvcdltlaskehaifkqtdadvtsfdggygsaylakmvgqkkareifflg
rnysaqeafemgmvnkvvphaeledtayewaqeilaksptsirmlkfamnltddgmvgqq
vfageatrlaymtdeakegrnaflekrkpdfgedqwis