PDB entry 6ogx

View 6ogx on RCSB PDB site
Description: Ternary complex of OX40R (TNFRSF4) bound to Fab1 and Fab2
Class: immune system
Keywords: TNFRSF4, CD134, OX40R, Fab, IMMUNE SYSTEM
Deposited on 2019-04-03, released 2019-07-10
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-07-10, with a file datestamp of 2019-07-05.
Experiment type: XRAY
Resolution: 2.77 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'C':
    Compound: Fab 1 Heavy Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6OGX (0-End)
  • Chain 'D':
    Compound: Fab1 Light Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6OGX (0-End)
    Domains in SCOPe 2.07: d6ogxd1, d6ogxd2
  • Chain 'G':
    Compound: Tumor necrosis factor receptor superfamily member 4
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFRSF4, TXGP1L
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ogxg1, d6ogxg2, d6ogxg3
  • Chain 'H':
    Compound: FAb2 Heavy Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6OGX
  • Chain 'L':
    Compound: FAb2 Light Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6OGX (0-End)
    Domains in SCOPe 2.07: d6ogxl1, d6ogxl2
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6ogxD (D:)
diqmtqspsslsasvgdrvtitcrasqdisnylnwyqqkpgkapklliyytsrlrsgvps
rfsgsgsgtdftltisslqpedfatyycqqghtlpptfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6ogxD (D:)
diqmtqspsslsasvgdrvtitcrasqdisnylnwyqqkpgkapklliyytsrlrsgvps
rfsgsgsgtdftltisslqpedfatyycqqghtlpptfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6ogxG (G:)
mgsshhhhhhssglvprgshmlhcvgdtypsndrcchecrpgngmvsrcsrsqntvcrpc
gpgfyndvvsskpckpctwcnlrsgserkqlctatqdtvcrcragtqpldsykpgvdcap
cppghfspgdnqackpwtnctlagkhtlqpasnssdaicedrd

    Sequence, based on observed residues (ATOM records): (download) 
    >6ogxG (G:)
cvgdtypsndrcchecrpgngmvsrcsrsqntvcrpcgpgfyndvvsskpckpctwcnlr
sgserkqlctatqdtvcrcragtqpldsykpgvdcapcppghfspgdnqackpwtnctla
gkhtlqpasnssdaicedrd

  • Chain 'H':
    No sequence available.

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6ogxL (L:)
diqmtqspsslsasvgdrvtitchasqdissyivwyqqkpgksfkgliyhgtnlesgvps
rfsgsgsgtdftltisslqpedfatyycvhyaqfpytfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6ogxL (L:)
diqmtqspsslsasvgdrvtitchasqdissyivwyqqkpgksfkgliyhgtnlesgvps
rfsgsgsgtdftltisslqpedfatyycvhyaqfpytfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfn