PDB entry 6ogo

View 6ogo on RCSB PDB site
Description: Crystal structure of NDM-9 metallo-beta-lactamase
Class: hydrolase
Keywords: metallo-beta-lactamase, NDM, HYDROLASE
Deposited on 2019-04-03, released 2020-04-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-05-20, with a file datestamp of 2020-05-15.
Experiment type: XRAY
Resolution: 1.43 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: subclass b1 metallo-beta-lactamase ndm-9
    Species: Escherichia coli [TaxId:562]
    Gene: BK248_28090, BK292_25365, BK373_25580, BK383_27845, CA593_27010
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ogoa_
  • Chain 'B':
    Compound: subclass b1 metallo-beta-lactamase ndm-9
    Species: Escherichia coli [TaxId:562]
    Gene: BK248_28090, BK292_25365, BK373_25580, BK383_27845, CA593_27010
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ogob_
  • Chain 'C':
    Compound: subclass b1 metallo-beta-lactamase ndm-9
    Species: Escherichia coli [TaxId:562]
    Gene: BK248_28090, BK292_25365, BK373_25580, BK383_27845, CA593_27010
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ogoc_
  • Heterogens: ZN, CL, PO4, EDO, PEG, PGE, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ogoA (A:)
ggeirptigqqmetgdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvl
vvdtawtddqtaqilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnq
lapqkgmvaaqhsltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafgg
clikdskakslgnlgdadtehyaasarafgaafpkasmivmshsapdsraaithtarmad
klr

    Sequence, based on observed residues (ATOM records): (download) 
    >6ogoA (A:)
tgdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvlvvdtawtddqtaq
ilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnqlapqkgmvaaqhs
ltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdskakslgn
lgdadtehyaasarafgaafpkasmivmshsapdsraaithtarmadkl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6ogoB (B:)
ggeirptigqqmetgdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvl
vvdtawtddqtaqilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnq
lapqkgmvaaqhsltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafgg
clikdskakslgnlgdadtehyaasarafgaafpkasmivmshsapdsraaithtarmad
klr

    Sequence, based on observed residues (ATOM records): (download) 
    >6ogoB (B:)
gdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvlvvdtawtddqtaqi
lnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnqlapqkgmvaaqhsl
tfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdskakslgnl
gdadtehyaasarafgaafpkasmivmshsapdsraaithtarmadklr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6ogoC (C:)
ggeirptigqqmetgdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvl
vvdtawtddqtaqilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnq
lapqkgmvaaqhsltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafgg
clikdskakslgnlgdadtehyaasarafgaafpkasmivmshsapdsraaithtarmad
klr

    Sequence, based on observed residues (ATOM records): (download) 
    >6ogoC (C:)
dqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvlvvdtawtddqtaqil
nwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnqlapqkgmvaaqhslt
faangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdskakslgnlg
dadtehyaasarafgaafpkasmivmshsapdsraaithtarmadkl