PDB entry 6ofh

View 6ofh on RCSB PDB site
Description: structure of salmonella type iii secretion system needle filament
Deposited on 2019-03-29, released 2019-07-10
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: EM
Resolution: 3.7 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'D':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'N':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'O':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'R':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'S':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'T':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'U':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):
  • Chain 'V':
    Compound: Protein prgI
    Species: Salmonella typhimurium (strain SL1344) [TaxId:216597]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ofhD (D:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhD (D:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6ofhE (E:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhE (E:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6ofhF (F:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhF (F:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6ofhG (G:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhG (G:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6ofhH (H:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhH (H:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6ofhI (I:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhI (I:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6ofhJ (J:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhJ (J:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'K':
    Sequence, based on SEQRES records:
    >6ofhK (K:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhK (K:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6ofhL (L:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhL (L:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'M':
    Sequence, based on SEQRES records:
    >6ofhM (M:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhM (M:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'N':
    Sequence, based on SEQRES records:
    >6ofhN (N:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhN (N:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'O':
    Sequence, based on SEQRES records:
    >6ofhO (O:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhO (O:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'P':
    Sequence, based on SEQRES records:
    >6ofhP (P:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhP (P:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'Q':
    Sequence, based on SEQRES records:
    >6ofhQ (Q:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhQ (Q:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'R':
    Sequence, based on SEQRES records:
    >6ofhR (R:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhR (R:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'S':
    Sequence, based on SEQRES records:
    >6ofhS (S:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhS (S:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'T':
    Sequence, based on SEQRES records:
    >6ofhT (T:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhT (T:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'U':
    Sequence, based on SEQRES records:
    >6ofhU (U:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhU (U:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr

  • Chain 'V':
    Sequence, based on SEQRES records:
    >6ofhV (V:)
matpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrna
qsntvkvfkdidaaiiqnfr

    Sequence, based on observed residues (ATOM records):
    >6ofhV (V:)
tpwsgylddvsakfdtgvdnlqtqvtealdklaakpsdpallaayqsklseynlyrnaqs
ntvkvfkdidaaiiqnfr