PDB entry 6oc5

View 6oc5 on RCSB PDB site
Description: Lanthanide-dependent methanol dehydrogenase XoxF from Methylobacterium extorquens, in complex with Lanthanum
Class: oxidoreductase
Keywords: XoxF, La, methanol, OXIDOREDUCTASE
Deposited on 2019-03-21, released 2020-05-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-06-24, with a file datestamp of 2020-06-19.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lanthanide-dependent methanol dehydrogenase XoxF
    Species: Methylorubrum extorquens AM1 [TaxId:272630]
    Gene: xoxF, MexAM1_META1p1740
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6oc5a_
  • Chain 'B':
    Compound: Lanthanide-dependent methanol dehydrogenase XoxF
    Species: Methylorubrum extorquens AM1 [TaxId:272630]
    Gene: xoxF, MexAM1_META1p1740
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6oc5b_
  • Heterogens: LA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6oc5A (A:)
mravhllalgaglaaaspalanesvlkgvanpaeqvlqtvdyantryskldqinasnvkn
lqvawtfstgvlrghegsplvvgnimyvhtpfpnivyaldldqgakivwkyepkqdpsvi
pvmccdtvnrglayadgaillhqadttlvsldaksgkvnwsvkngdpskgetntatvlpv
kdkvivgisggefgvqchvtaydlksgkkvwrgysigpddqlivdpekttslgkpigkds
slktwegdqwktgggctwgwfsydpkldlmyygsgnpstwnpkqrpgdnkwsmtiwarnp
dtgmakwvyqmtphdewdfdginemiltdqkfdgkdrpllthfdrngfgytldratgevl
vaekfdpvvnwatkvdldkgsktygrplvvskysteqngedvnskgicpaalgtkdqqpa
afspktglfyvptnhvcmdyepfrvtytpgqpyvgatlsmypapgshggmgnfiawdnlq
gkikwsnpeqfsawggalatagdvvfygtlegflkavdsktgkelykfktpsgiignvmt
yehkgkqhvavlsgvggwagiglaagltdpnaglgavggyaalssytnlggqltvfslpn
n

    Sequence, based on observed residues (ATOM records): (download) 
    >6oc5A (A:)
nesvlkgvanpaeqvlqtvdyantryskldqinasnvknlqvawtfstgvlrghegsplv
vgnimyvhtpfpnivyaldldqgakivwkyepkqdpsvipvmccdtvnrglayadgaill
hqadttlvsldaksgkvnwsvkngdpskgetntatvlpvkdkvivgisggefgvqchvta
ydlksgkkvwrgysigpddqlivdpekttslgkpigkdsslktwegdqwktgggctwgwf
sydpkldlmyygsgnpstwnpkqrpgdnkwsmtiwarnpdtgmakwvyqmtphdewdfdg
inemiltdqkfdgkdrpllthfdrngfgytldratgevlvaekfdpvvnwatkvdldkgs
ktygrplvvskysteqngedvnskgicpaalgtkdqqpaafspktglfyvptnhvcmdye
pfrvtytpgqpyvgatlsmypapgshggmgnfiawdnlqgkikwsnpeqfsawggalata
gdvvfygtlegflkavdsktgkelykfktpsgiignvmtyehkgkqhvavlsgvggwagi
glaagltdpnaglgavggyaalssytnlggqltvfslpn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6oc5B (B:)
mravhllalgaglaaaspalanesvlkgvanpaeqvlqtvdyantryskldqinasnvkn
lqvawtfstgvlrghegsplvvgnimyvhtpfpnivyaldldqgakivwkyepkqdpsvi
pvmccdtvnrglayadgaillhqadttlvsldaksgkvnwsvkngdpskgetntatvlpv
kdkvivgisggefgvqchvtaydlksgkkvwrgysigpddqlivdpekttslgkpigkds
slktwegdqwktgggctwgwfsydpkldlmyygsgnpstwnpkqrpgdnkwsmtiwarnp
dtgmakwvyqmtphdewdfdginemiltdqkfdgkdrpllthfdrngfgytldratgevl
vaekfdpvvnwatkvdldkgsktygrplvvskysteqngedvnskgicpaalgtkdqqpa
afspktglfyvptnhvcmdyepfrvtytpgqpyvgatlsmypapgshggmgnfiawdnlq
gkikwsnpeqfsawggalatagdvvfygtlegflkavdsktgkelykfktpsgiignvmt
yehkgkqhvavlsgvggwagiglaagltdpnaglgavggyaalssytnlggqltvfslpn
n

    Sequence, based on observed residues (ATOM records): (download) 
    >6oc5B (B:)
nesvlkgvanpaeqvlqtvdyantryskldqinasnvknlqvawtfstgvlrghegsplv
vgnimyvhtpfpnivyaldldqgakivwkyepkqdpsvipvmccdtvnrglayadgaill
hqadttlvsldaksgkvnwsvkngdpskgetntatvlpvkdkvivgisggefgvqchvta
ydlksgkkvwrgysigpddqlivdpekttslgkpigkdsslktwegdqwktgggctwgwf
sydpkldlmyygsgnpstwnpkqrpgdnkwsmtiwarnpdtgmakwvyqmtphdewdfdg
inemiltdqkfdgkdrpllthfdrngfgytldratgevlvaekfdpvvnwatkvdldkgs
ktygrplvvskysteqngedvnskgicpaalgtkdqqpaafspktglfyvptnhvcmdye
pfrvtytpgqpyvgatlsmypapgshggmgnfiawdnlqgkikwsnpeqfsawggalata
gdvvfygtlegflkavdsktgkelykfktpsgiignvmtyehkgkqhvavlsgvggwagi
glaagltdpnaglgavggyaalssytnlggqltvfslpn