PDB entry 6o8d

View 6o8d on RCSB PDB site
Description: anti-cd28xcd3 codv fab bound to cd28
Deposited on 2019-03-09, released 2019-11-20
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 3.55 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'C':
    Compound: T-cell-specific surface glycoprotein CD28
    Species: Homo sapiens [TaxId:9606]
    Gene: CD28
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Anti-CD28xCD3 CODV Fab Heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6O8D (0-End)
  • Chain 'L':
    Compound: Anti-CD28xCD3 CODV Fab Light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6O8D (0-337)
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6o8dC (C:)
nkilvkqspmlvaydnavnlsckysynlfsrefraslhkgldsavevcvvygnysqqlqv
ysktgfncdgklgnesvtfylqnlyvnqtdiyfckievmypppyldneksngtiihvkhh
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >6o8dC (C:)
kilvkqspmlvaydnavnlsckysynlfsrefraslhkgldsavevcvvygnysqqlqvy
sktgfncdgklgnesvtfylqnlyvnqtdiyfckievmypppyldneksngtiih

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6o8dH (H:)
qvqlvqsgaevvkpgasvkvsckasgytftsyyihwvrqapgqglewigsiypgnvntny
aqkfqgratltvdtsistaymelsrlrsddtavyyctrshygldwnfdvwgkgttvtvss
sqvqlvesgggvvqpgrslrlscaasgftftkawmhwvrqapgkqlewvaqikdksnsya
tyyadsvkgrftisrddskntlylqmnslraedtavyycrgvyyalspfdywgqgtlvtv
ssrtastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpav
lqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkththhhhhh

    Sequence, based on observed residues (ATOM records):
    >6o8dH (H:)
qvqlvqsgaevvkpgasvkvsckasgytftsyyihwvrqapgqglewigsiypgnvntny
aqkfqgratltvdtsistaymelsrlrsddtavyyctrshygldwnfdvwgkgttvtvss
sqvqlvesgggvvqpgrslrlscaasgftftkawmhwvrqapgkqlewvaqikdksnsya
tyyadsvkgrftisrddskntlylqmnslraedtavyycrgvyyalspfdywgqgtlvtv
ssrtastkgpsvfplapsskgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6o8dL (L:)
divmtqtplslsvtpgqpasisckssqslvhnnantylswylqkpgqspqsliykvsnrf
sgvpdrfsgsgsgtdftlkisrveaedvgvyycgqgtqypftfgsgtkveikgqpkaapd
iqmtqspsslsasvgdrvtitcqasqniyvwlnwyqqkpgkapklliykasnlhtgvpsr
fsgsgsgtdftltisslqpediatyycqqgqtypytfgqgtkleiktkgpsrtvaapsvf
ifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysls
stltlskadyekhkvyacevthqglsspvtksfnrgec