PDB entry 6o79

View 6o79 on RCSB PDB site
Description: crystal structure of csm1-csm4 cassette in complex with ca3
Deposited on 2019-03-07, released 2019-07-31
The last revision was dated 2019-09-18, with a file datestamp of 2019-09-13.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A)
    Species: Thermococcus onnurineus [TaxId:342948]
    Gene: csm1, cas10, TON_0893
    Database cross-references and differences (RAF-indexed):
    • Uniprot B6YWB8 (14-End)
      • conflict (602)
  • Chain 'B':
    Compound: Csm4
    Species: Thermococcus onnurineus (strain NA1) [TaxId:523850]
    Gene: TON_0896
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: cyclic RNA cA3
    Species: synthetic construct, synthetic [TaxId:32630]

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6o79A (A:)
mgsshhhhhhsqdpmeideltalggllhdigkpvqraglysgdhstqgarflrdlaentg
raeyellslfsefhhkghmkndelmirrikelsperfgltmedvlnalwivyeadnlasg
ereegqpqasrplysvfnpgkaypwaeldfekelpvpgdvfsirsqdyrelvkrlweels
kaklrsdrllpvlekyltfvssvtsegniislydhmrmtsaialamlragctaedvrsgr
crkekrflliegdfsgiqdfiyrvsgkgtlkylrarsayleligwdvvleilsrlgltra
nvvfnagghfmiiaqntpdavkeleeirakavewlyrefesdlylaiewepvsgrefgre
ggknlfaearkrlkhkltvrklkrfgeikglfehghterlaecpvcgrelpegklepsas
dpetkvcptcnrlvslggnlpkllgfgrtakndagvlvegpfsgfvpylqggrpvgeqil
vkntlnpgeipesaqfvpyfvadyfkkdpkggvatfeelsmastgtrrlgvmkgdvdrlg
effssmdspsklatasrfmdyffkgyigaiiegkfgyiigdvpslrdwpeepdivvvyag
gdaffivgawdqifelafrvrrafnaytggkltlsvglgyfdertpiyrmadvvserldt
akdegrnrvfvvgrsrpldgkhklsyewnhyeelwrtyapriyagngrlkgkleskkgll
wklleirelyvrdpndvrwayltayllgrhglsdlfpelvgidtkaverkepqpvywvdg
vlkivlmavrr

    Sequence, based on observed residues (ATOM records):
    >6o79A (A:)
meideltalggllhdigkpvqraglysgdhstqgarflrdlaentgraeyellslfsend
elmirrikelsperfgltmedvlnalwivyeadnlaspqasrplysvfnpgkaypwaeld
fekelpvpgdvfsirsqdyrelvkrlweelskaklrsdrllpvlekyltfvssvtsegni
islydhmrmtsaialamlragctaedgrcrkekrflliegdfsgiqdfiyrvstlkylra
rsayleligwdvvleilsrlgltranvvfnagghfmiiaqntpdavkeleeirakavewl
yrefesdlylaiewepvsgrefgregnlfaearkrlkhkltvrklkrfgeikglfecnrl
vslgpkllgfgrtakndagvlvegpfsgfvpylqggrpvgeqilvkntlnpgeipesaqf
vpyfvadyfkkdpkggvatfeelsmastgtrrlgvmkgdvdrlgeffssmdspsklatas
rfmdyffkgyigaiiegkfgyiigdvpslrdwpeepdivvvyaggdaffivgawdqifel
afrvrrafnaytggkltlsvglgyfdertpiyrmadvvserldtakdegrnrvfvvgrsr
pldgkhklsyewnhyeelwrtyapriyagngrlkgkleskkgllwklleirelyvrdpnd
vrwayltlsdlfpelvgidtkaverkepqpvywvdgvlkivlmavr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6o79B (B:)
mpkfiavklipkgpfrdipradtlfgaignaisaihgqsaveelvdafvggarissafpy
sgdtyylpkplsvepalegiltgldeeeryttakrlrkakyldlknfelalrlrpftipe
eipyarvdvprvvldrvtqdssiyfweeirfreksgvyflysgprevfdgyiapamrflg
dtgiggkstwgaglfevefhemkidapgseysvtlsnalptktpvlwrllrkggwsfgrr
kprmtfiaegsivkndpggmerlelglshevyvygltfplgvelpegle

    Sequence, based on observed residues (ATOM records):
    >6o79B (B:)
pkfiavklipkgpfrdipradtlfgaignaisaihgqsaveelvdafvggarissafpys
gdtyylpkplsvepalegdeeeryttakrlrkakyldlknfelalrlrpftipeeipyar
vdvprfweeirfreksgvyflysgprevfdgyiapamrflgdlfevefhemkidapgsey
svtlsnalptktpvlwrllrkrmtfiaegsivkndpggmerlelglshevyvygltfplg
velpeg

  • Chain 'C':
    No sequence available.