PDB entry 6o3x

View 6o3x on RCSB PDB site
Description: crystal structure of yeast nrd1 cid in complex with sen1 nim2
Deposited on 2019-02-27, released 2019-06-05
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: XRAY
Resolution: 1.99 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein NRD1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: NRD1, YNL251C, N0868
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53617 (21-End)
      • expression tag (19-20)
  • Chain 'B':
    Compound: Protein NRD1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: NRD1, YNL251C, N0868
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53617 (21-End)
      • expression tag (20)
  • Chain 'C':
    Compound: Protein NRD1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: NRD1, YNL251C, N0868
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53617 (21-End)
      • expression tag (20)
  • Chain 'D':
    Compound: Helicase SEN1
    Species: SACCHAROMYCES CEREVISIAE, synthetic [TaxId:4932]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Helicase SEN1
    Species: SACCHAROMYCES CEREVISIAE, synthetic [TaxId:4932]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Helicase SEN1
    Species: SACCHAROMYCES CEREVISIAE, synthetic [TaxId:4932]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6o3xA (A:)
mgsshhhhhhssglvprgshmdfqnfvatlesfkdlksgisgsrikklttyaldhidies
kiisliidysrlcpdshklgslyiidsigrayldetrsnsnsssnkpgtcahaintlgev
iqellsdaiaksnqdhkekirmlldiwdrsglfqksylnairskcfamdisn

    Sequence, based on observed residues (ATOM records):
    >6o3xA (A:)
hmdfqnfvatlesfkdlksgisgsrikklttyaldhidieskiisliidysrlcpdshkl
gslyiidsigrayldetrsnsnsssnkpgtcahaintlgeviqellsdaiaksnqdhkek
irmlldiwdrsglfqksylnairskcfa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6o3xB (B:)
mgsshhhhhhssglvprgshmdfqnfvatlesfkdlksgisgsrikklttyaldhidies
kiisliidysrlcpdshklgslyiidsigrayldetrsnsnsssnkpgtcahaintlgev
iqellsdaiaksnqdhkekirmlldiwdrsglfqksylnairskcfamdisn

    Sequence, based on observed residues (ATOM records):
    >6o3xB (B:)
mdfqnfvatlesfkdlksgisgsrikklttyaldhidieskiisliidysrlcpdshklg
slyiidsigrayldetrkpgtcahaintlgeviqellsdaiaksnqdhkekirmlldiwd
rsglfqksylnairskcf

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6o3xC (C:)
mgsshhhhhhssglvprgshmdfqnfvatlesfkdlksgisgsrikklttyaldhidies
kiisliidysrlcpdshklgslyiidsigrayldetrsnsnsssnkpgtcahaintlgev
iqellsdaiaksnqdhkekirmlldiwdrsglfqksylnairskcfamdisn

    Sequence, based on observed residues (ATOM records):
    >6o3xC (C:)
mdfqnfvatlesfkdlksgisgsrikklttyaldhidieskiisliidysrlcpdshklg
slyiidsigrayldetrsnsnsssnkpgtcahaintlgeviqellsdaiaksnqdhkeki
rmlldiwdrsglfqksylnairskcf

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6o3xD (D:)
ddeddytpsisd

    Sequence, based on observed residues (ATOM records):
    >6o3xD (D:)
ddytps

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6o3xE (E:)
ddeddytpsisd

    Sequence, based on observed residues (ATOM records):
    >6o3xE (E:)
ddytps

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6o3xF (F:)
ddeddytpsisd

    Sequence, based on observed residues (ATOM records):
    >6o3xF (F:)
ddytps