PDB entry 6o1a

View 6o1a on RCSB PDB site
Description: alpha-l-fucosidase alfc from lactobacillus casei in complex with alpha-l-fucose product
Deposited on 2019-02-18, released 2020-02-19
The last revision was dated 2020-12-16, with a file datestamp of 2020-12-11.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: AlfC
    Species: Lactobacillus casei [TaxId:1582]
    Database cross-references and differences (RAF-indexed):
    • Uniprot K0NB39 (Start-343)
      • expression tag (344)
  • Chain 'B':
    Compound: AlfC
    Species: Lactobacillus casei [TaxId:1582]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: AlfC
    Species: Lactobacillus casei [TaxId:1582]
    Database cross-references and differences (RAF-indexed):
    • Uniprot K0NB39 (Start-343)
      • expression tag (344)
  • Chain 'D':
    Compound: AlfC
    Species: Lactobacillus casei [TaxId:1582]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: FUL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6o1aA (A:)
mndnvawfkqakygmmihwglysllageyrgesssayaewiqskfqipnaeygnlatafn
plyfdakkivalakqcgmqylvvttkhhdgfamyhskvdaynvydatpfhrdiigelaea
cqkaglkfglyysqdldwhdpngggyksndvetagttwdnswdfpdedqknfdlcfdnki
lpqikeimsnygdiatawfdvpmtlseaqsqtiydtvrelqpnclinsrlgngkydfvsl
gdneipknkedmnktdvdyneitgfkpsplglyetagtindswgfsyhdqnwktprtlyr
ykqhlndfginyllnvgldplgrvpmmaeenllaakaledeanrl

    Sequence, based on observed residues (ATOM records):
    >6o1aA (A:)
ndnvawfkqakygmmihwglysllageyrgesssayaewiqskfqipnaeygnlatafnp
lyfdakkivalakqcgmqylvvttkhhdgfamyhskvdaynvydatpfhrdiigelaeac
qkaglkfglyysqdldwhdpngggyksndvetagttwdnswdfpdedqknfdlcfdnkil
pqikeimsnygdiatawfdvpmtlseaqsqtiydtvrelqpnclinsrlgngkydfvslg
dneipkfkpsplglyetagtindswgfsyhdqnwktprtlyrykqhlndfginyllnvgl
dplgrvpmmaeenllaakaledeanrl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6o1aB (B:)
mndnvawfkqakygmmihwglysllageyrgesssayaewiqskfqipnaeygnlatafn
plyfdakkivalakqcgmqylvvttkhhdgfamyhskvdaynvydatpfhrdiigelaea
cqkaglkfglyysqdldwhdpngggyksndvetagttwdnswdfpdedqknfdlcfdnki
lpqikeimsnygdiatawfdvpmtlseaqsqtiydtvrelqpnclinsrlgngkydfvsl
gdneipknkedmnktdvdyneitgfkpsplglyetagtindswgfsyhdqnwktprtlyr
ykqhlndfginyllnvgldplgrvpmmaeenllaakaledeanrl

    Sequence, based on observed residues (ATOM records):
    >6o1aB (B:)
nvawfkqakygmmihwglysllageyrgesssayaewiqskfqipnaeygnlatafnply
fdakkivalakqcgmqylvvttkhhdgfamyhskvdaynvydatpfhrdiigelaeacqk
aglkfglyysqdldwhdpngggyksndvetagttwdnswdfpdedqknfdlcfdnkilpq
ikeimsnygdiatawfdvpmtlseaqsqtiydtvrelqpnclinsrlgngkydfvslgdn
esplglyetagtindswgfsyhdqnwktprtlyrykqhlndfginyllnvgldplgrvpm
maeenllaakaledeanr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6o1aC (C:)
mndnvawfkqakygmmihwglysllageyrgesssayaewiqskfqipnaeygnlatafn
plyfdakkivalakqcgmqylvvttkhhdgfamyhskvdaynvydatpfhrdiigelaea
cqkaglkfglyysqdldwhdpngggyksndvetagttwdnswdfpdedqknfdlcfdnki
lpqikeimsnygdiatawfdvpmtlseaqsqtiydtvrelqpnclinsrlgngkydfvsl
gdneipknkedmnktdvdyneitgfkpsplglyetagtindswgfsyhdqnwktprtlyr
ykqhlndfginyllnvgldplgrvpmmaeenllaakaledeanrl

    Sequence, based on observed residues (ATOM records):
    >6o1aC (C:)
ndnvawfkqakygmmihwglysllageyrgesssayaewiqskfqipnaeygnlatafnp
lyfdakkivalakqcgmqylvvttkhhdgfamyhskvdaynvydatpfhrdiigelaeac
qkaglkfglyysqdldwhdpngggyksndvetagttwdnswdfpdedqknfdlcfdnkil
pqikeimsnygdiatawfdvpmtlseaqsqtiydtvrelqpnclinsrlgngkydfvslg
dneipkpsplglyetagtindswgfsyhdqnwktprtlyrykqhlndfginyllnvgldp
lgrvpmmaeenllaakaledeanrl

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6o1aD (D:)
mndnvawfkqakygmmihwglysllageyrgesssayaewiqskfqipnaeygnlatafn
plyfdakkivalakqcgmqylvvttkhhdgfamyhskvdaynvydatpfhrdiigelaea
cqkaglkfglyysqdldwhdpngggyksndvetagttwdnswdfpdedqknfdlcfdnki
lpqikeimsnygdiatawfdvpmtlseaqsqtiydtvrelqpnclinsrlgngkydfvsl
gdneipknkedmnktdvdyneitgfkpsplglyetagtindswgfsyhdqnwktprtlyr
ykqhlndfginyllnvgldplgrvpmmaeenllaakaledeanrl

    Sequence, based on observed residues (ATOM records):
    >6o1aD (D:)
ndnvawfkqakygmmihwglysllageyrgesssayaewiqskfqipnaeygnlatafnp
lyfdakkivalakqcgmqylvvttkhhdgfamyhskvdaynvydatpfhrdiigelaeac
qkaglkfglyysqdldwhdpngggyksndvetagttwdnswdfpdedqknfdlcfdnkil
pqikeimsnygdiatawfdvpmtlseaqsqtiydtvrelqpnclinsrlgngkydfvslg
dneisplglyetagtindswgfsyhdqnwktprtlyrykqhlndfginyllnvgldplgr
vpmmaeenllaakaledeanr