PDB entry 6o06

View 6o06 on RCSB PDB site
Description: extracellular factors prime enterovirus particles for uncoating
Deposited on 2019-02-15, released 2019-06-12
The last revision was dated 2019-11-13, with a file datestamp of 2019-11-08.
Experiment type: EM
Resolution: 3.6 Å
R-factor: N/A
AEROSPACI score: 0.08 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: vp1
    Species: Echovirus E1 [TaxId:46633]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: vp2
    Species: Echovirus E1 [TaxId:46633]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: vp3
    Species: Echovirus E1 [TaxId:46633]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6o06A (A:)
gdvqnavegamvrvadtvqtsatnservpnltavetghtsqavpgdtmqtrhvinnhvrs
estienflarsacvfyleyktgtkedsnsfnnwvittrrvaqlrrklemftylrfdmeit
vvitssqdqstsqnqnapvlthqimyvppggpipvsvddyswqtstnpsifwtegnapar
msipfisignaysnfydgwshfsqagvygfttlnnmgqlffrhvnkpnpaaitsvariyf
kpkhvrawvprpprlcpyinstnvnfepkpvtevrtniitt

    Sequence, based on observed residues (ATOM records):
    >6o06A (A:)
nnhvrsestienflarsacvfyleyktgtkedsnsfnnwvittrrvaqlrrklemftylr
fdmeitvvitssqdqsapvlthqimyvppggpipvsvddyswqtstnpsifwtegnapar
msipfisignaysnfydgwshfsqagvygfttlnnmgqlffrhvnkpnpaaitsvariyf
kpkhvrawvprpprlcpyinstnvnfepkpvtevrtniit

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6o06B (B:)
gysdrvrsitlgnstittqecanvvvgygewpeylsdneataedqptqpdvatcrfytld
svqwengspgwwwkfpdalrdmglfgqnmyyhylgragytihvqcnaskfhqgcilvvcv
peaemgsaqtsgvvnyehiskgeiasrftttttaedhgvqaavwnagmgvgvgnltifph
qwinlrtnnsativmpyvnsvpmdnmyrhhnftlmiipfvpldfsagastyvpitvtvap
mcaeynglrlaghq

    Sequence, based on observed residues (ATOM records):
    >6o06B (B:)
rvrsitlgnstittqecanvvvgygewpeylsdneataedqptvatcrfytldsvqweng
spgwwwkfpdalrdmglfgqnmyyhylgragytihvqcnaskfhqgcilvvcvpeaemgs
aqtsgvvnyehiskgeiasrftttttaedhgvqaavwnagmgvgvgnltifphqwinlrt
nnsativmpyvnsvpmdnmyrhhnftlmiipfvpldfsagastyvpitvtvapmcaeyng
lrlaghq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6o06C (C:)
glptmntpgsnqfltsddfqspsampqfdvtpemhipgevrnlmeiaevdsvmpinndsa
akvssmeayrvelstntnagtqvfgfqlnpgaesvmnrtlmgeilnyyahwsgsikitfv
fcgsamttgkfllsyappgagapktrkdamlgthvvwdvglqsscvlcipwisqthyrfv
ekdpytnagfvtcwyqtsvvspasnqpkcymmcmvsacndfsvrmlrdtkfieqtsfyq

    Sequence, based on observed residues (ATOM records):
    >6o06C (C:)
ptmntpgsnqfltsddfqspsampqfdvtpemhipgevrnlmeiaevdsvmpinndsaak
vssmeayrvelstntnagtqvfgfqlnpgaesvmnrtlmgeilnyyahwsgsikitfvfc
gsamttgkfllsyappgagapktrkdamlgthvvwdvglqsscvlcipwisqtnagfvtc
wyqtsvvspasnqpkcymmcmvsacndfsvrmlrdtkfieqtsf