PDB entry 6nuw

View 6nuw on RCSB PDB site
Description: yeast ctf19 complex
Deposited on 2019-02-03, released 2019-04-03
The last revision was dated 2019-11-20, with a file datestamp of 2019-11-15.
Experiment type: EM
Resolution: 4.25 Å
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: Inner kinetochore subunit IML3
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: IML3, MCM19, YBR107C, YBR0836
    Database cross-references and differences (RAF-indexed):
    • Uniprot P38265 (3-End)
      • expression tag (1-2)
  • Chain 'C':
    Compound: Inner kinetochore subunit MCM21
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: MCM21, CTF5, YDR318W
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Inner kinetochore subunit CTF19
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: CTF19, MCM18, YPL018W, LPB13W
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Inner kinetochore subunit CHL4
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: CHL4, CTF17, MCM17, YDR254W, YD9320A.04
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Inner kinetochore subunit OKP1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: OKP1, YGR179C
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Inner kinetochore subunit NKP1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: NKP1, YDR383C
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Inner kinetochore subunit CTF3,Inner kinetochore subunit CTF3
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Gene: CTF3, CHL3, YLR381W
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Inner kinetochore subunit AME1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: AME1, ARP100, YBR211C, YBR1458
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Inner kinetochore subunit NKP2
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: NKP2, YLR315W
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: Inner kinetochore subunit Mcm16
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Database cross-references and differences (RAF-indexed):
    • PDB 6NUW (0-74)
  • Chain 'U':
    Compound: Unknown (unassigned)
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Database cross-references and differences (RAF-indexed):
    • PDB 6NUW (0-22)
  • Chain 'X':
    Compound: Inner kinetochore subunit Mcm22
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Database cross-references and differences (RAF-indexed):
    • PDB 6NUW (0-125)
  • Chain 'Y':
    Compound: Inner kinetochore subunit CTF3,Inner kinetochore subunit CTF3
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Gene: CTF3, CHL3, YLR381W
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q12748
    • PDB 6NUW (736-772)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6nuwB (B:)
    snampytwkflgiskqlslengiaklnqllnlevdldiqtirvpsdpdggtaadeyirye
    mrldisnldegtyskfiflgnskmevpmflcycgtdnrnevvlqwlkaeygvimwpikfe
    qktmikladasivhvtkenieqitwfssklyfepetqdknlrqfsieipresceglalgy
    gntmhpyndaivpyiynetgmaverlpltsvilaghtkimresivtstrslrnrvlavvl
    qsiqftse
    

    Sequence, based on observed residues (ATOM records):
    >6nuwB (B:)
    nampytwkflgiskqlslengiaklnqllnlevdldiqtirvpsdpdggtaadeyiryem
    rldisnldegtyskfiflgnskmevpmflcycgtdnrnevvlqwlkaeygvimwpikfeq
    ktmikladasivhvtkenieqitwfssklyfepetqdknlrqfsieipresceglalgyg
    ntmhpyndaivpyiynetgmaverlpltsvilaghtkimresivtstrslrnrvlavvlq
    siqf
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6nuwC (C:)
    snamsriddlqqdiesllseinsleesreklkakikdkrkneesanpivqefedlfdqfp
    qlnnflfnehpeleetddkdisraqadipatpipyepkkrakleneeilpeqewvlktqp
    mvqhqmfdpgvadlldtdiltspskrkrklkiddistsdrseledyivlenvyrmfgitf
    fplvdpidlkikdasgeifvdremlgirlevfsertsqfekphyvllkkriksnswflfk
    htipsfidvqgifddtngglvishddaylfakrvflqlvevqkrrqifkdleakkiihdl
    dldlessmvsffvkdikvelfvkqneivscsilddihdfsqnnkskweiallgslddlel
    klnhsfatifk
    

    Sequence, based on observed residues (ATOM records):
    >6nuwC (C:)
    stsdrseledyivlenvyrmfgitffplvdpidlkgeifvdremlgirlevfsertsqfe
    kphyvllkkriksnswflfkhtipsfidvqgifddtngglvishddaylfakrvflqlve
    vqkrrqifkdleakkiihdldldlessmvsffvkdikvelfvkqneivscssqnnkskwe
    iallgslddlelkl
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6nuwD (D:)
    mdftsdttnshdtsnshlsledavgthhageadvnidgdekqqlslldddqvralklqee
    kdalltrrntllqeiqtyqnilmkennsktkngdilqnditqdflnlisisssnpnsais
    drkrveringltnlqkelvtkydtlpllnmnlrlsylrdhtyphlqvsvqsrdrvhndgi
    evlvvnykfcrntmnpfeiqfkmfykfedstllkweilristnvrlkakqllatrnfqkc
    llslyefdkikskktgifqnlinllkrktrcylmnnsdsliverviregrlttiklqinf
    iitmpgergkprncflpmskisialwkggerfnqidldeicyglikeygvktglkeicnv
    clfpdmyar
    

    Sequence, based on observed residues (ATOM records):
    >6nuwD (D:)
    veringltnlqkelvtkydtlpllnmnlrlsylrdhtyphlqvsvqsrdndgievlvvny
    kfcrntmnpfeiqfstllkweilristnvrlkakqllatrnfqkcllslyefdkikskkt
    gifqnlinllkrktrcysliverqinfiitmpgergkprncflpnqidldeicyglikey
    gvktglkeicnvclfp
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6nuwE (E:)
    snamsnelrlednyvptsdtlvvfkqlmklpvtvlydltlswfakfggsfdgdiylltet
    ldlliekgvrrnvivnrilyvywpdglnvfqlaeidchlmiskpekfkwlpskalrgdgk
    pyvvklqpakfienlqtdlakiyhchvymfkhpslpvlitriqlfdsnnlflstpnigsi
    nkeslynkldkfqgkplisrrpyyvafplnspiifhsvdkdiyarlvlqsisrtiseret
    iifkpvqkipvksihnimtllgpsrfaesmgpwecyasanfersplhdykkhqgltgkkv
    mvrefddsflnddenfygkeepeirrlrleknmikfkgsangvmdqkyndlkefnehvhn
    irngkknedsgepvyisrysslvpiekvgftlkneinsriitiklkfngndifgglhelc
    dknlinidkvpgwlagengsfsgtimngdfqreqvakggll
    

    Sequence, based on observed residues (ATOM records):
    >6nuwE (E:)
    dtlvvfkqlmklpvtvlydltlswfakdiylltetldlliekgvrrnvivnrilyvywln
    vfqlaeidchlmiskpekfkwlpskalrgdgkpyvvklqpakfienlqtdlakiyhchvy
    mfkhpslpvlitriqlfdsnnlgkplisrrpyyvafplnspiifhsvdkdiyarlvlqsi
    srtiseretiifkpvqkipvksihnimtllgpsrfaesmgpwecyasanfersplhdykk
    hqgltgkkvmvrefddsflnddenfygkeepeirrlrleknmikfkgssrysslvpiekv
    gftlkneinsriitiklkfngndifgglhelcdknlinidkvpgwlagengsfsgtimng
    dfqreqvak
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6nuwF (F:)
    maadrdnflqniendsinngqamdlspnrsssesdssilmnvndiktlrldvapeakstq
    skkslfyensddaeegeieertnkeegqyhhkgskqlrfevgkestgklqshlsdgsats
    gegnvrpwefrkviqaeyrerlprnyelkhwkkpskimigsilrlletntvsaldsvfek
    yekemnqmthgdnnevkriyskkerlleiiltkikkklrqakfpsriserdldieyiysk
    rqfiqnrysqelqnnerleailsreqnlleetrklcmnlktnnkkrltekliqkdlhpvl
    nkameytyglestngfmhpdgpvtfrndshelnlmlndpikstadvrldkeevlsllpsl
    keytkkskelketmgqmisdsheeeikevfvphheshqdkteedih
    

    Sequence, based on observed residues (ATOM records):
    >6nuwF (F:)
    ilrlletntvsaldsvfekyekemnqmthgdnnevkriyskkerlleiiltkikkklrqa
    kfpdieyiyskrqfiqnrysqelqnnerleailsreqnlleetrklcmnlktnnkkrlte
    kliqkdvtfrndshelnlmlndpikstadvrldkeevlsllpslkeytkkskelketmgq
    misdsheeei
    

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6nuwG (G:)
    snamtdtynsisnfieneltallssddylmddlagelpnevcrllkaqviekrkdamsrg
    kqdllskeiydneselrasqsqqimelvgdipkyslgselrnrvegepqstsierliedv
    lklpqmevadeeevevendlkvlseysnlrkdlilkcqalqigesklsdilsqtnsinsl
    ttsikeasedddiseyfatyngklvvaleemkllleeavktfgnspekrekikkilselk
    k
    

    Sequence, based on observed residues (ATOM records):
    >6nuwG (G:)
    tynsisnfieneltallssddylmddlagelpnrllkaqviekrkdamsrgkqdllskei
    ydneselrasqsqqimelvgdipkyslgselrnrvegepqstsierliedvlklpndlkv
    lseysnlrkdlilkcqalqigesklsdilsqtnsinsldddiseyfatyngklvva
    

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6nuwH (H:)
    snamslilddiilsltnanertppqalkttlsllyekskqyglsspqlqalvrllcetsi
    idtvtkvyivencflpdgyltkellleiinhlgtptvfsryriqtppvlqsalckwlvhv
    yflfpvhserehnisssiwlhlwqfsflqkwitplviwqattpvdvkpwklsiikrcamh
    pgyrdapgsatlilqrfqclvgassqitesiitincnrktlkshrnlkldahflsilkri
    lsrahpanfpadtvqntidmylseihqlgadsiyplrlqslpeyvpsdstvslwdvtsle
    qlaqnwpqlhipndvdymmkpslnsnvllprkvmsrdslkhlyssiiliknsrdessspy
    ewciwqlkrcfahqietpqevipiiisvssmdnklssriiqtfcnlkylkldeltlkkvc
    ggilplwkpelisgtreffvkfmasifmwstrdghdnnctfsetcfyvlqmitnwvlddk
    lialgltllhdmqslltldkifnnatsnrfstmafissldiltqlskqtksdyaiqyliv
    gpdimnkvfssddplllsaacrylvatknklmqypstnkfvrmqnqyimdltnylyrnkv
    lsskslfgvspdffkqilenlyiptadfknakfftitgipalsyiciiilrrletaentk
    ikftsgiineetfnnffrvhhdeigqhgwikgvnnihdlrvkilmhlsntanpyrdiaaf
    lftylkslskysvqnsxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
    

    Sequence, based on observed residues (ATOM records):
    >6nuwH (H:)
    pqlqalvrllcetsiidtvtkvyilleiinhpvlqsalckwlvhvyflhnisssiwlhlw
    qfsflqkwitplviwqattpvdvkpwklsiikrcamhpgyrdapgsatlilqrfqclvga
    ssqitesiitincnrktlkshrnlkldahflseqlaqnwpqlhipndvdymmkpslnsnv
    llprkvmsrdslkhlyssiiliknsrdessspyewciwqlkrcfahqietpqevipiiis
    vssmdnklssriiltlkkvcggilplwkpelisgtreffvkfmasifmwstrdghdnnct
    fs
    

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6nuwI (I:)
    mdrdtklafrlrgshsrrtddidddvivfktpnavyreenspiqspvqpilsspklansf
    efpittnnvnaqdrhehgyqpldaedypmidsenkslisespqnvrndedlttrynfddi
    pirqlsssitsvttidvlsslfinlfendlipqalkdfnksdddqfrkllykldlrlfqt
    isdqmtrdlkdildinvsnnelcyqlkqvlarkedlnqqiisvrneiqelkagkdwhdlq
    neqaklndkvklnkrlndltstllgkyegdrkimsqdseddsirddsnildiahfvdlmd
    pyngllkkinkinenlsnelqpslhhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6nuwI (I:)
    qlsssitsvttidvlsslfinlfendllykldlrlfqtisdqmtrdlkdildinvsnnel
    cyqlkqvlarkedlnqqiisvrneiqelkagkdwhdlqneqaklndkvklnkrlndltst
    llgkyegdrkimsqdildiahfvdlmdpyngllkkinkinenlsnelq
    

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6nuwJ (J:)
    mnseqllhnyvsdsllttlisfqefkqqlqsytsdeqqlqhwyellqardarvtselear
    ikqffitlrsrllrfleseqlshslsletlidalykindllqqrlqilddaiqektsela
    efenmvrspsagdnaipgllqiiqsyinlleen
    

    Sequence, based on observed residues (ATOM records):
    >6nuwJ (J:)
    nseqllhnyvsdsllttlisfqefkqqlqsytsdeqqlqhwyellqardarvtseleari
    kqffitlrsrllrflesslsletlidalykindllqqrlqilddaiqektselaefenmv
    rspsagdnaipgllqiiqsyinlleen
    

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records:
    >6nuwM (M:)
    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
    xxxxxxxxxxxxxxx
    

  • Chain 'U':
    Sequence; same for both SEQRES and ATOM records:
    >6nuwU (U:)
    xxxxxxxxxxxxxxxxxxxxxxx
    

  • Chain 'X':
    Sequence; same for both SEQRES and ATOM records:
    >6nuwX (X:)
    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
    xxxxxx
    

  • Chain 'Y':
    Sequence, based on SEQRES records:
    >6nuwY (Y:)
    snamslilddiilsltnanertppqalkttlsllyekskqyglsspqlqalvrllcetsi
    idtvtkvyivencflpdgyltkellleiinhlgtptvfsryriqtppvlqsalckwlvhv
    yflfpvhserehnisssiwlhlwqfsflqkwitplviwqattpvdvkpwklsiikrcamh
    pgyrdapgsatlilqrfqclvgassqitesiitincnrktlkshrnlkldahflsilkri
    lsrahpanfpadtvqntidmylseihqlgadsiyplrlqslpeyvpsdstvslwdvtsle
    qlaqnwpqlhipndvdymmkpslnsnvllprkvmsrdslkhlyssiiliknsrdessspy
    ewciwqlkrcfahqietpqevipiiisvssmdnklssriiqtfcnlkylkldeltlkkvc
    ggilplwkpelisgtreffvkfmasifmwstrdghdnnctfsetcfyvlqmitnwvlddk
    lialgltllhdmqslltldkifnnatsnrfstmafissldiltqlskqtksdyaiqyliv
    gpdimnkvfssddplllsaacrylvatknklmqypstnkfvrmqnqyimdltnylyrnkv
    lsskslfgvspdffkqilenlyiptadfknakfftitgipalsyiciiilrrletaentk
    ikftsgiineetfnnffrvhhdeigqhgwikgvnnihdlrvkilmhlsntanpyrdiaaf
    lftylkslskysvqnsxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
    

    Sequence, based on observed residues (ATOM records):
    >6nuwY (Y:)
    dymmkpslnsnvllrkvmsrdslkhlyssiiliknsrdessspyewciwqlkrcfaialg
    ltllhdmqaentkikftsgiineetfnnffrvhhqhgwikgvnnihdlrvkilxxxxxxx
    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx