PDB entry 6npi
View 6npi on RCSB PDB site
Description: Crystal structure of Epstein-Barr Virus Nuclear Antigen-1, EBNA1, bound to fragments
Class: viral protein/inhibitor
Keywords: EBNA1, DNA binding protein, Epstein-Barr Virus, viral protein, viral protein-inhibitor complex
Deposited on
2019-01-17, released
2019-03-20
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-03-20, with a file datestamp of
2019-03-15.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.49
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Epstein-Barr nuclear antigen 1
Species: Epstein-Barr virus (strain B95-8) [TaxId:10377]
Gene: EBNA1, BKRF1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6npia1, d6npia2 - Chain 'B':
Compound: Epstein-Barr nuclear antigen 1
Species: Epstein-Barr virus (strain B95-8) [TaxId:10377]
Gene: EBNA1, BKRF1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6npib_ - Heterogens: 60Q, KW1, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6npiA (A:)
shmgqggsnpkfeniaeglrallarshverttdegtwvagvfvyggsktslynlrrgtal
aipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtk
paptcnirvtvcsfddgvdlp
Sequence, based on observed residues (ATOM records): (download)
>6npiA (A:)
hmgqggsnpkfeniaeglrallarshverttdegtwvagvfvyggsktslynlrrgtala
ipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkp
aptcnirvtvcsfddgvdlp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6npiB (B:)
shmgqggsnpkfeniaeglrallarshverttdegtwvagvfvyggsktslynlrrgtal
aipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtk
paptcnirvtvcsfddgvdlp
Sequence, based on observed residues (ATOM records): (download)
>6npiB (B:)
snpkfeniaeglrallarshverttdegtwvagvfvyggsktslynlrrgtalaipqcrl
tplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcni
rvtvcsfddgvdlp