PDB entry 6nkp

View 6nkp on RCSB PDB site
Description: epha2 lbd in complex with ba-wla-yskbio peptide
Deposited on 2019-01-07, released 2019-05-01
The last revision was dated 2019-12-04, with a file datestamp of 2019-11-29.
Experiment type: XRAY
Resolution: 2.03 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ephrin type-A receptor 2
    Species: Homo sapiens [TaxId:9606]
    Gene: EPHA2, ECK
    Database cross-references and differences (RAF-indexed):
    • Uniprot P29317 (7-179)
      • expression tag (5-6)
  • Chain 'B':
    Compound: Ephrin type-A receptor 2
    Species: Homo sapiens [TaxId:9606]
    Gene: EPHA2, ECK
    Database cross-references and differences (RAF-indexed):
    • Uniprot P29317 (7-179)
      • expression tag (5-6)
      • expression tag (180-183)
  • Chain 'C':
    Compound: bA-WLA-YSKbio peptide
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6NKP
  • Chain 'D':
    Compound: bA-WLA-YSKbio peptide
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6NKP (0-End)
  • Heterogens: BAL, BTN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6nkpA (A:)
masqgpgevvlldfaaaggelgwlthpygkgwdlmqnimndmpiymysvcnvmsgdqdnw
lrtnwvyrgeaerifielkftvrdcnsfpggasscketfnlyyaesdldygtnfqkrlft
kidtiapdeitvssdfearhvklnveersvgpltrkgfylafqdigacvallsvrvyykk
ahhhhhh

    Sequence, based on observed residues (ATOM records):
    >6nkpA (A:)
pgevvlldfaaaggelgwlthpygkgwdlmqnimndmpiymysvcnvmsgdqdnwlrtnw
vyrgeaerifielkftvrdcnsfpggasscketfnlyyaesdldygtnfqkrlftkidti
apdeitvssdfearhvklnveersvgpltrkgfylafqdigacvallsvrvyykk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6nkpB (B:)
masqgpgevvlldfaaaggelgwlthpygkgwdlmqnimndmpiymysvcnvmsgdqdnw
lrtnwvyrgeaerifielkftvrdcnsfpggasscketfnlyyaesdldygtnfqkrlft
kidtiapdeitvssdfearhvklnveersvgpltrkgfylafqdigacvallsvrvyykk
ahhhhhh

    Sequence, based on observed residues (ATOM records):
    >6nkpB (B:)
pgevvlldfaaaggelgwlthpygkgwdlmqnimndmpiymysvcnvmsgdqdnwlrtnw
vyrgeaerifielkftvrdcnsfpggasscketfnlyyaesdldygtnfqkrlftkidti
apdeitvssdfearhvklnveersvgpltrkgfylafqdigacvallsvrvyykkahhh

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6nkpC (C:)
awlaypdsvpysk

    Sequence, based on observed residues (ATOM records):
    >6nkpC (C:)
wlaypdsvpys

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6nkpD (D:)
awlaypdsvpysk

    Sequence, based on observed residues (ATOM records):
    >6nkpD (D:)
awlaypdsvpys