PDB entry 6nkd

View 6nkd on RCSB PDB site
Description: crystal structure of the lipase lip_vut3 from goat rumen metagenome.
Deposited on 2019-01-07, released 2020-01-22
The last revision was dated 2020-01-22, with a file datestamp of 2020-01-17.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lip_vut3, C2L
    Species: metagenome [TaxId:256318]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Lip_vut3, C2L
    Species: metagenome [TaxId:256318]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, EDO, CL, FMT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6nkdA (A:)
mtlqytalgdsltvgvgaglfepgfvqrykrkmeedlneevslivfaksgletseilaml
nepfimeqvkkadvititgcgndllqsleiyekekdehvfleasshcqknysgmlekire
ikgekdtrylvrllnlynpfpsieladkwisgfnrhlkqlesapqikvidtyavfkgrek
eylsidrvhpssrgyeamseklraagygrleghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6nkdA (A:)
tlqytalgdsltvgvgaglfepgfvqrykrkmeedlneevslivfaksgletseilamln
epfimeqvkkadvititgcgndllqsleiyekekdehvfleasshcqknysgmlekirei
kgekdtrylvrllnlynpfpsieladkwisgfnrhlkqlesapqikvidtyavfkgreke
ylsidrvhpssrgyeamseklraagygrle

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6nkdB (B:)
mtlqytalgdsltvgvgaglfepgfvqrykrkmeedlneevslivfaksgletseilaml
nepfimeqvkkadvititgcgndllqsleiyekekdehvfleasshcqknysgmlekire
ikgekdtrylvrllnlynpfpsieladkwisgfnrhlkqlesapqikvidtyavfkgrek
eylsidrvhpssrgyeamseklraagygrleghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6nkdB (B:)
tlqytalgdsltvgvgaglfepgfvqrykrkmeedlneevslivfaksgletseilamln
epfimeqvkkadvititgcgndllqsleiyekekdehvfleasshcqknysgmlekirei
kgekdtrylvrllnlynpfpsieladkwisgfnrhlkqlesapqikvidtyavfkgreke
ylsidrvhpssrgyeamseklraagygrle