PDB entry 6nk2

View 6nk2 on RCSB PDB site
Description: epha2 lbd in complex with ba-wla-yrpk bio peptide
Deposited on 2019-01-04, released 2019-05-01
The last revision was dated 2019-12-04, with a file datestamp of 2019-11-29.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ephrin type-A receptor 2
    Species: Homo sapiens [TaxId:9606]
    Gene: EPHA2, ECK
    Database cross-references and differences (RAF-indexed):
    • Uniprot P29317 (7-179)
      • expression tag (4-6)
      • expression tag (180)
  • Chain 'B':
    Compound: Ephrin type-A receptor 2
    Species: Homo sapiens [TaxId:9606]
    Gene: EPHA2, ECK
    Database cross-references and differences (RAF-indexed):
    • Uniprot P29317 (7-179)
      • expression tag (2-6)
      • expression tag (180)
  • Chain 'C':
    Compound: bA-WLA-YPRKbio peptide
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6NK2 (0-13)
  • Chain 'D':
    Compound: bA-WLA-YPRKbio peptide
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6NK2 (Start-13)
  • Heterogens: BAL, PEG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6nk2A (A:)
masqgpgevvlldfaaaggelgwlthpygkgwdlmqnimndmpiymysvcnvmsgdqdnw
lrtnwvyrgeaerifielkftvrdcnsfpggasscketfnlyyaesdldygtnfqkrlft
kidtiapdeitvssdfearhvklnveersvgpltrkgfylafqdigacvallsvrvyykk
ahhhhhh

    Sequence, based on observed residues (ATOM records):
    >6nk2A (A:)
gpgevvlldfaaaggelgwlthpygkgwdlmqnimndmpiymysvcnvmsgdqdnwlrtn
wvyrgeaerifielkftvrdcnsfpggasscketfnlyyaesdldygtnfqkrlftkidt
iapdeitvssdfearhvklnveersvgpltrkgfylafqdigacvallsvrvyykka

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6nk2B (B:)
masqgpgevvlldfaaaggelgwlthpygkgwdlmqnimndmpiymysvcnvmsgdqdnw
lrtnwvyrgeaerifielkftvrdcnsfpggasscketfnlyyaesdldygtnfqkrlft
kidtiapdeitvssdfearhvklnveersvgpltrkgfylafqdigacvallsvrvyykk
ahhhhhh

    Sequence, based on observed residues (ATOM records):
    >6nk2B (B:)
sqgpgevvlldfaaaggelgwlthpygkgwdlmqnimndmpiymysvcnvmsgdqdnwlr
tnwvyrgeaerifielkftvrdcnsfpggasscketfnlyyaesdldygtnfqkrlftki
dtiapdeitvssdfearhvklnveersvgpltrkgfylafqdigacvallsvrvyykka

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6nk2C (C:)
awlaypdsvpyrpk

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6nk2D (D:)
awlaypdsvpyrpk

    Sequence, based on observed residues (ATOM records):
    >6nk2D (D:)
wlaypdsvpyrpk