PDB entry 6nhh

View 6nhh on RCSB PDB site
Description: rhodobacter sphaeroides bc1 with azoxystrobin
Deposited on 2018-12-21, released 2019-06-19
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cytochrome b
    Species: Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [TaxId:272943]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: cytochrome c1
    Species: Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [TaxId:272943]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: ubiquinol-cytochrome c reductase iron-sulfur subunit
    Species: Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [TaxId:272943]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: cytochrome b
    Species: Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [TaxId:272943]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: cytochrome c1
    Species: Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [TaxId:272943]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: ubiquinol-cytochrome c reductase iron-sulfur subunit
    Species: Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [TaxId:272943]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HEM, AZO, 6PE, 8SP, SR, BOG, HEC, FES

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6nhhA (A:)
msgiphdhyeprtgiekwlhsrlpivalaydtimiptprnlnwmwiwgvvlafclvlqiv
tgivlamhytphvdlafasvehimrnvnggfmlrylhangaslffiavylhifrglyygs
ykaprevtwivgmliylammatafmgyvlpwgqmsfwgatvitglfgaipgighsiqtwl
lggpavdnatlnrffslhyllpfviaalvaihiwafhstgnnnptgvevrrtskaeaqkd
tvpfwpyfiikdvfalavvllvffaivgfmpnylghpdnyieanplstpahivpewyflp
fyailraftadvwvvqianfisfgiidakffgvlamfgailvmalvpwldtspvrsgryr
pmfkiyfwllaadfviltwvgaqqttfpydwisliasaywfayflvilpilgaiekpvap
patieedfnahyspatggtktvvae

    Sequence, based on observed residues (ATOM records):
    >6nhhA (A:)
giphdhyeprtgiekwlhsrlpivalaydtimiptprnlnwmwiwgvvlafclvlqivtg
ivlamhytphvdlafasvehimrnvnggfmlrylhangaslffiavylhifrglyygsyk
aprevtwivgmliylammatafmgyvlpwgqmsfwgatvitglfgaipgighsiqtwllg
gpavdnatlnrffslhyllpfviaalvaihiwafhstgnnnptgvevrrtskaeaqkdtv
pfwpyfiikdvfalavvllvffaivgfmpnylghpdnyieanplstpahivpewyflpfy
ailraftadvwvvqianfisfgiidakffgvlamfgailvmalvpwldtspvrsgryrpm
fkiyfwllaadfviltwvgaqqttfpydwisliasaywfayflvilpilgaiekpvappa
tieedfnahy

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6nhhB (B:)
aggghvedvpfsfegpfgtfdqhqlqrglqvytevcaachgmkfvpirslsepggpelpe
dqvrayatqftvtdeetgedregkptdhfphsalenapdlslmakaragfhgpmgtgisq
lfngiggpeyiysvltgfpeeppkcaeghepdgfyynrafqngsvpdtckdangvkttag
swiamppplmddlveyadghdasvhamaedvsaflmwaaepklmarkqagftavmfltvl
svllyltnkrlwagvkgkkktnvgtghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6nhhB (B:)
aggghvedvpfsfegpfgtfdqhqlqrglqvytevcaachgmkfvpirslsepggpelpe
dqvrayatqftvtdeetgedregkptdhfphsalenapdlslmakaragfhgpmgtgisq
lfngiggpeyiysvltgfpeeppkcaeghepdgfyynrafqngsvpdtckdangvkttag
swiamppplmddlveyadghdasvhamaedvsaflmwaaepklmarkqagftavmfltvl
svllyltnkrlwagvk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6nhhC (C:)
msnaedhagtrrdflyyatagagavatgaavwplinqmnpsadvqalasifvdvssvepg
vqltvkflgkpifirrrteadielgrsvqlgqlvdtnarnanidagaeatdqnrtldeag
ewlvmwgvcthlgcvpiggvsgdfggwfcpchgshydsagrirkgpapenlpiplakfid
ettiqlg

    Sequence, based on observed residues (ATOM records):
    >6nhhC (C:)
dflyyatagagavatgaavwplinqmnpsadvqalasifvdvssvepgvqltvkflgkpi
firrrteadielgrsvqlgqlvdtnarnanidagaeatdqnrtldeagewlvmwgvcthl
gcvpiggvsgdfggwfcpchgshydsagrirkgpapenlpiplakfidettiqlg

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6nhhE (E:)
msgiphdhyeprtgiekwlhsrlpivalaydtimiptprnlnwmwiwgvvlafclvlqiv
tgivlamhytphvdlafasvehimrnvnggfmlrylhangaslffiavylhifrglyygs
ykaprevtwivgmliylammatafmgyvlpwgqmsfwgatvitglfgaipgighsiqtwl
lggpavdnatlnrffslhyllpfviaalvaihiwafhstgnnnptgvevrrtskaeaqkd
tvpfwpyfiikdvfalavvllvffaivgfmpnylghpdnyieanplstpahivpewyflp
fyailraftadvwvvqianfisfgiidakffgvlamfgailvmalvpwldtspvrsgryr
pmfkiyfwllaadfviltwvgaqqttfpydwisliasaywfayflvilpilgaiekpvap
patieedfnahyspatggtktvvae

    Sequence, based on observed residues (ATOM records):
    >6nhhE (E:)
giphdhyeprtgiekwlhsrlpivalaydtimiptprnlnwmwiwgvvlafclvlqivtg
ivlamhytphvdlafasvehimrnvnggfmlrylhangaslffiavylhifrglyygsyk
aprevtwivgmliylammatafmgyvlpwgqmsfwgatvitglfgaipgighsiqtwllg
gpavdnatlnrffslhyllpfviaalvaihiwafhstgnnnptgvevrrtskaeaqkdtv
pfwpyfiikdvfalavvllvffaivgfmpnylghpdnyieanplstpahivpewyflpfy
ailraftadvwvvqianfisfgiidakffgvlamfgailvmalvpwldtspvrsgryrpm
fkiyfwllaadfviltwvgaqqttfpydwisliasaywfayflvilpilgaiekpvappa
tieedfnahy

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6nhhF (F:)
aggghvedvpfsfegpfgtfdqhqlqrglqvytevcaachgmkfvpirslsepggpelpe
dqvrayatqftvtdeetgedregkptdhfphsalenapdlslmakaragfhgpmgtgisq
lfngiggpeyiysvltgfpeeppkcaeghepdgfyynrafqngsvpdtckdangvkttag
swiamppplmddlveyadghdasvhamaedvsaflmwaaepklmarkqagftavmfltvl
svllyltnkrlwagvkgkkktnvgtghhhhhh

    Sequence, based on observed residues (ATOM records):
    >6nhhF (F:)
aggghvedvpfsfegpfgtfdqhqlqrglqvytevcaachgmkfvpirslsepggpelpe
dqvrayatqftvtdeetgedregkptdhfphsalenapdlslmakaragfhgpmgtgisq
lfngiggpeyiysvltgfpeeppkcaeghepdgfyynrafqngsvpdtckdangvkttag
swiamppplmddlveyadghdasvhamaedvsaflmwaaepklmarkqagftavmfltvl
svllyltnkrlwagvk

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6nhhG (G:)
msnaedhagtrrdflyyatagagavatgaavwplinqmnpsadvqalasifvdvssvepg
vqltvkflgkpifirrrteadielgrsvqlgqlvdtnarnanidagaeatdqnrtldeag
ewlvmwgvcthlgcvpiggvsgdfggwfcpchgshydsagrirkgpapenlpiplakfid
ettiqlg

    Sequence, based on observed residues (ATOM records):
    >6nhhG (G:)
dflyyatagagavatgaavwplinqmnpsadvqalasifvdvssvepgvqltvkflgkpi
firrrteadielgrsvqlgqlvdtnarnanidagaeatdqnrtldeagewlvmwgvcthl
gcvpiggvsgdfggwfcpchgshydsagrirkgpapenlpiplakfidettiqlg