PDB entry 6ndx

View 6ndx on RCSB PDB site
Description: lysinoalanine cross-linked flge dimer from treponema denticola
Deposited on 2018-12-14, released 2019-08-14
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: XRAY
Resolution: 3.04 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Flagellar hook protein flgE
    Species: Treponema denticola [TaxId:158]
    Gene: flgE
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9RQB6
      • engineered mutation (87)
  • Chain 'B':
    Compound: Flagellar hook protein flgE
    Species: Treponema denticola [TaxId:158]
    Gene: flgE
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9RQB6
      • engineered mutation (87)
  • Chain 'C':
    Compound: Flagellar hook protein flgE
    Species: Treponema denticola [TaxId:158]
    Gene: flgE
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9RQB6 (0-End)
      • conflict (10)
  • Chain 'D':
    Compound: Flagellar hook protein flgE
    Species: Treponema denticola [TaxId:158]
    Gene: flgE
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9RQB6 (0-End)
      • conflict (10)
  • Heterogens: DAL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ndxA (A:)
ntdlaiqgngffilkdgektfytragafgidkegtlvnpangmrvqgwmaeeaegfriin
tsgqtedlnipigqkldakattsvnyaanldkrlpelpeganraqilestwstefkvyds
fgeahelqidfarvpgevnawratvnvdptnadatatrvgigttdgvqnsfivrfdnngh
lasvtdtagnvtspagqvlvqisynvvganpdeagaptrhtfdvnlgeigtskntitqfs
dksttkayeqdgytlgylenfridqsgiitgvysngvrqeigqiamagfanqgglekagq
ntyvqsnnsgianvstsgtvgkgyfiggtlems

    Sequence, based on observed residues (ATOM records):
    >6ndxA (A:)
nipigqkldakattsvnyaanldkrlpelpeganraqilestwstefkvydsfgeahelq
idfarvpgevnawratvnvdptnadatatrvgigttdgvqnsfivrfdnnghlasvtdta
gnvtspagqvlvqisynvvganpdeagaptrhtfdvnlgettkayeqdgytlgylenfri
dqsgiitgvysngvrqeigqi

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ndxB (B:)
ntdlaiqgngffilkdgektfytragafgidkegtlvnpangmrvqgwmaeeaegfriin
tsgqtedlnipigqkldakattsvnyaanldkrlpelpeganraqilestwstefkvyds
fgeahelqidfarvpgevnawratvnvdptnadatatrvgigttdgvqnsfivrfdnngh
lasvtdtagnvtspagqvlvqisynvvganpdeagaptrhtfdvnlgeigtskntitqfs
dksttkayeqdgytlgylenfridqsgiitgvysngvrqeigqiamagfanqgglekagq
ntyvqsnnsgianvstsgtvgkgyfiggtlems

    Sequence, based on observed residues (ATOM records):
    >6ndxB (B:)
dlnipigqkldakattsvnyaanldkrlpelpeganraqilestwstefkvydsfgeahe
lqidfarvpgevnawratvnvdptnadatatrvgigttdgvqnsfivrfdnnghlasvtd
tagnvtspagqvlvqisynvvganpdeagaptrhtfdvnlgeigtskntitqfsdksttk
ayeqdgytlgylenfridqsgiitgvysngvrqeigqi

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ndxC (C:)
akattsvnyaanldkrlpelpeganraqilestwstefkvydsfgeahelqidfarvpge
vnawratvnvdptnadatatrvgigttdgvqnsfivrfdnnghlasvtdtagnvtspagq
vlvqisynvvganpdeagaptrhtfdvnlgeigtskntitqfsdksttkayeqdgyt

    Sequence, based on observed residues (ATOM records):
    >6ndxC (C:)
akattsvnyaanldkrlpelganraqilestwstefkvydsfgeahelqidfarvpgevn
awratvnvdptnadatatrvgigttdgvqnsfivrfdnnghlasvtdtagnvtspagqvl
vqisynvvganpdeagaptrhtfdvnlgeigtskntitqfsdksttkayeq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ndxD (D:)
akattsvnyaanldkrlpelpeganraqilestwstefkvydsfgeahelqidfarvpge
vnawratvnvdptnadatatrvgigttdgvqnsfivrfdnnghlasvtdtagnvtspagq
vlvqisynvvganpdeagaptrhtfdvnlgeigtskntitqfsdksttkayeqdgyt

    Sequence, based on observed residues (ATOM records):
    >6ndxD (D:)
akattsvnyaanldkrlpelpeganraqilestwstefkvydsfgeahelqidfarvpge
vnawratvnvdptnadatatrvgigttdgvqnsfivrfdnnghlasvtdtagnvtspagq
vlvqisynvvganpdeagaptrhtfdvnlgeigtskntitqfsdksttkaye