PDB entry 6nb8

View 6nb8 on RCSB PDB site
Description: Crystal structure of anti- SARS-CoV human neutralizing S230 antibody Fab fragment
Class: immune system
Keywords: Fab, Coronavirus, SARS, Glycoprotein, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, SSGCID, IMMUNE SYSTEM
Deposited on 2018-12-06, released 2019-02-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: S230 antigen-binding (Fab) fragment, heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6NB8 (0-229)
    Domains in SCOPe 2.08: d6nb8h_
  • Chain 'L':
    Compound: S230 antigen-binding (Fab) fragment, light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6NB8 (0-218)
    Domains in SCOPe 2.08: d6nb8l1, d6nb8l2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6nb8H (H:)
qaqlvesggalvqpgrslrlscaasgftfrnyamhwvrqapatglqwlavitsdgrnkfy
adsvkgrftisredskntlylqmdslrgedtavyycvtqrdnsrdyfphyfhdmdvwgqg
ttvavssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtf
pavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6nb8L (L:)
dvvltqsplslpvtlgqpasiscrssqslvysdgdtylnwfqqrpgqsprrliyqvsnrd
sgvpdrfsgsgsgtdftlkisrveaedvgvyycmqgshwpptfgqgtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec