PDB entry 6nal

View 6nal on RCSB PDB site
Description: Crystal Structure of Gram Negative Toxin
Class: toxin
Keywords: toxin, cytolysin
Deposited on 2018-12-05, released 2019-12-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-04, with a file datestamp of 2019-11-29.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thiol-activated cytolysin
    Species: Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) [TaxId:577650]
    Gene: Despr_1128
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6nala1, d6nala2
  • Chain 'B':
    Compound: Thiol-activated cytolysin
    Species: Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) [TaxId:577650]
    Gene: Despr_1128
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6nalb1, d6nalb2
  • Heterogens: PG4, IMD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6nalA (A:)
gnnralindklaslqynpktvmvfngtsisnidlpaeerfddstyivmtrekcsyeadfd
iavpsayedvtypgallvasndlldgkpqelavdkdrvnitvdlpgatdisfkvvptfan
vragindilskwfdshggewslpanfqyssslvydenelmlkfgcdisylkqklsidfss
traekksvylirfkqifysvsaerpakpadifaesttwedlaragiseehpplfvknvqy
grqiflkfesklsstelettikgtcskdglkidanasaalkeklsqidvsivvhggseav
ynglslnsmddvqkinriiwdntllsrtntaaplnyytvflkdgvsagvhgtteyvaekt
erysggeirlehsgwyvarftvtwdeisyenglkvirhkgwegngkdrtapfsttiplrg
narnisiktegctglawewwrtsgykvgralvplrtvsiggttlhqtfsmtpad

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6nalB (B:)
gnnralindklaslqynpktvmvfngtsisnidlpaeerfddstyivmtrekcsyeadfd
iavpsayedvtypgallvasndlldgkpqelavdkdrvnitvdlpgatdisfkvvptfan
vragindilskwfdshggewslpanfqyssslvydenelmlkfgcdisylkqklsidfss
traekksvylirfkqifysvsaerpakpadifaesttwedlaragiseehpplfvknvqy
grqiflkfesklsstelettikgtcskdglkidanasaalkeklsqidvsivvhggseav
ynglslnsmddvqkinriiwdntllsrtntaaplnyytvflkdgvsagvhgtteyvaekt
erysggeirlehsgwyvarftvtwdeisyenglkvirhkgwegngkdrtapfsttiplrg
narnisiktegctglawewwrtsgykvgralvplrtvsiggttlhqtfsmtpad

    Sequence, based on observed residues (ATOM records): (download) 
    >6nalB (B:)
nnralindklaslqynpktvmvfngtsisnidlpaeerfddstyivmtrekcsyeadfdi
avpsayedvtypgallvasndlldgkpqelavdkdrvnitvdlpgatdisfkvvptfanv
ragindilskwfdshggewslpanfqyssslvydenelmlkfgcdisylkqklsidfsst
raekksvylirfkqifysvsaerpakpadifaesttwedlaragiseehpplfvknvqyg
rqiflkfesklsstelettikgtcskdglkidanasaalkeklsqidvsivvhggseavy
nglslnsmddvqkinriiwdntllsrtntaaplnyytvflkdgvsagvhgtteyvaekte
rysggeirlehsgwyvarftvtwdeisyenglkvirhkgwegngkdrtapfsttiplrgn
arnisiktegctglawewwrtsgykvgralvplrtvsiggttlhqtfsmtpad