PDB entry 6n9q

View 6n9q on RCSB PDB site
Description: structure of the quorum quenching lactonase from parageobacillus caldoxylosilyticus bind to substrate c4-ahl
Deposited on 2018-12-03, released 2019-04-03
The last revision was dated 2019-08-14, with a file datestamp of 2019-08-09.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'D':
    Compound: Lactonase GcL
    Species: Parageobacillus caldoxylosilyticus NBRC 107762 [TaxId:1220594]
    Gene: GCA01S_030_00190
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: Lactonase GcL
    Species: Parageobacillus caldoxylosilyticus NBRC 107762 [TaxId:1220594]
    Gene: GCA01S_030_00190
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HL4, CO, SO4, EDO, 1PE, FE, ACT, PGE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6n9qD (D:)
manvikarpklyvmdngrmrmdknwmiamhnpatihnpnaqtefvefpiytvlidhpegk
ilfdtscnpnsmgpqgrwaestqqmfpwtateecylhnrleqlkvrpediryvvashlhl
dhagclemftnatiivhedefngalqcyarnqkegayiwadidawiknnlqwrtvkrhed
nillaegvkvlnfgsghawgmlglhvelpetggiilasdaiytaesygppikppgiiyds
lgymntverirriaqetksqvwfghdaeqfkkfrkstegyye

    Sequence, based on observed residues (ATOM records):
    >6n9qD (D:)
karpklyvmdngrmrmdknwmiamhnpatihnpnaqtefvefpiytvlidhpegkilfdt
scnpnsmgpqgrwaestqqmfpwtateecylhnrleqlkvrpediryvvashlhldhagc
lemftnatiivhedefngalqcyarnqkegayiwadidawiknnlqwrtvkrhednilla
egvkvlnfgsghawgmlglhvelpetggiilasdaiytaesygppikppgiiydslgymn
tverirriaqetksqvwfghdaeqfkkfrkstegyye

  • Chain 'P':
    Sequence, based on SEQRES records:
    >6n9qP (P:)
manvikarpklyvmdngrmrmdknwmiamhnpatihnpnaqtefvefpiytvlidhpegk
ilfdtscnpnsmgpqgrwaestqqmfpwtateecylhnrleqlkvrpediryvvashlhl
dhagclemftnatiivhedefngalqcyarnqkegayiwadidawiknnlqwrtvkrhed
nillaegvkvlnfgsghawgmlglhvelpetggiilasdaiytaesygppikppgiiyds
lgymntverirriaqetksqvwfghdaeqfkkfrkstegyye

    Sequence, based on observed residues (ATOM records):
    >6n9qP (P:)
karpklyvmdngrmrmdknwmiamhnpatihnpnaqtefvefpiytvlidhpegkilfdt
scnpnsmgpqgrwaestqqmfpwtateecylhnrleqlkvrpediryvvashlhldhagc
lemftnatiivhedefngalqcyarnqkegayiwadidawiknnlqwrtvkrhednilla
egvkvlnfgsghawgmlglhvelpetggiilasdaiytaesygppikppgiiydslgymn
tverirriaqetksqvwfghdaeqfkkfrkstegyye