PDB entry 6n0y

View 6n0y on RCSB PDB site
Description: crystal structure of anaerolinea thermophila mevalonate 5-phosphate decarboxylase complexed with (r)-mvapp
Deposited on 2018-11-07, released 2019-07-17
The last revision was dated 2019-11-20, with a file datestamp of 2019-11-15.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Diphosphomevalonate decarboxylase
    Species: Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) [TaxId:926569]
    Gene: mvaD, ANT_19910
    Database cross-references and differences (RAF-indexed):
    • Uniprot E8N6F3 (4-End)
      • expression tag (3)
  • Chain 'B':
    Compound: Diphosphomevalonate decarboxylase
    Species: Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) [TaxId:926569]
    Gene: mvaD, ANT_19910
    Database cross-references and differences (RAF-indexed):
    • Uniprot E8N6F3 (4-End)
      • expression tag (3)
  • Chain 'C':
    Compound: Diphosphomevalonate decarboxylase
    Species: Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) [TaxId:926569]
    Gene: mvaD, ANT_19910
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Diphosphomevalonate decarboxylase
    Species: Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) [TaxId:926569]
    Gene: mvaD, ANT_19910
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Diphosphomevalonate decarboxylase
    Species: Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) [TaxId:926569]
    Gene: mvaD, ANT_19910
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Diphosphomevalonate decarboxylase
    Species: Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) [TaxId:926569]
    Gene: mvaD, ANT_19910
    Database cross-references and differences (RAF-indexed):
  • Heterogens: DP6, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6n0yA (A:)
gshgmgqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsredt
lilngaladepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalala
atsaiglhlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltd
ciailstqhkpigstqghalastsplqparvadtprrleivrrailerdflslaemiehd
snlmhavmmtstpplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaee
vifrltsipgvqtvlkasagdsaklieqsl

    Sequence, based on observed residues (ATOM records):
    >6n0yA (A:)
gmgqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsredtlil
ngaladepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalalaats
aiglhlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltdcia
ilstqhkpigstqghalastsplqparvadtprrleivrrailerdflslaemiehdsnl
mhavmmtstpplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaeevif
rltsipgvqtvlkasagdsaklieq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6n0yB (B:)
gshgmgqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsredt
lilngaladepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalala
atsaiglhlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltd
ciailstqhkpigstqghalastsplqparvadtprrleivrrailerdflslaemiehd
snlmhavmmtstpplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaee
vifrltsipgvqtvlkasagdsaklieqsl

    Sequence, based on observed residues (ATOM records):
    >6n0yB (B:)
gmgqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsredtlil
ngaladepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalalaats
aiglhlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltdcia
ilstqhkpigstqghalastsplqparvadtprrleivrrailerdflslaemiehdsnl
mhavmmtstpplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaeevif
rltsipgvqtvlkasagdsaklie

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6n0yC (C:)
gshgmgqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsredt
lilngaladepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalala
atsaiglhlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltd
ciailstqhkpigstqghalastsplqparvadtprrleivrrailerdflslaemiehd
snlmhavmmtstpplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaee
vifrltsipgvqtvlkasagdsaklieqsl

    Sequence, based on observed residues (ATOM records):
    >6n0yC (C:)
mgqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsredtliln
galadepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalalaatsa
iglhlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltdciai
lstqhkpigstqghalastsplqparvadtprrleivrrailerdflslaemiehdsnlm
havmmtstpplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaeevifr
ltsipgvqtvlkasagdsaklie

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6n0yD (D:)
gshgmgqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsredt
lilngaladepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalala
atsaiglhlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltd
ciailstqhkpigstqghalastsplqparvadtprrleivrrailerdflslaemiehd
snlmhavmmtstpplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaee
vifrltsipgvqtvlkasagdsaklieqsl

    Sequence, based on observed residues (ATOM records):
    >6n0yD (D:)
mgqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsredtliln
galadepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalalaatsa
iglhlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltdciai
lstqhkpigstqghalastsplqparvadtprrleivrrailerdflslaemiehdsnlm
havmmtstpplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaeevifr
ltsipgvqtvlkasagdsaklieq

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6n0yE (E:)
gshgmgqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsredt
lilngaladepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalala
atsaiglhlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltd
ciailstqhkpigstqghalastsplqparvadtprrleivrrailerdflslaemiehd
snlmhavmmtstpplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaee
vifrltsipgvqtvlkasagdsaklieqsl

    Sequence, based on observed residues (ATOM records):
    >6n0yE (E:)
gqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsredtlilng
aladepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalalaatsai
glhlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltdciail
stqhkpigstqghalastsplqparvadtprrleivrrailerdflslaemiehdsnlmh
avmmtstpplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaeevifrl
tsipgvqtvlkasagdsakli

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6n0yF (F:)
gshgmgqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsredt
lilngaladepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalala
atsaiglhlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltd
ciailstqhkpigstqghalastsplqparvadtprrleivrrailerdflslaemiehd
snlmhavmmtstpplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaee
vifrltsipgvqtvlkasagdsaklieqsl

    Sequence, based on observed residues (ATOM records):
    >6n0yF (F:)
gqataiahpniafikywgnrdavlripengsismnlaeltvkttvifekhsdtlilngal
adepalkrvshfldrvrefagiswhahvisennfptgagiassaaafaalalaatsaigl
hlserdlsrlarkgsgsacrsipggfvewipgetdedsyavsiappehwaltdciailpi
gstqghalastsplqparvadtprrleivrrailerdflslaemiehdsnlmhavmmtst
pplfywepvslvimksvrewresglpcaytldagpnvhvicpseyaeevifrltsipgvq
tvlkasagdsaklieq