PDB entry 6myr

View 6myr on RCSB PDB site
Description: Avian mitochondrial complex II with thiapronil bound
Class: oxidoreductase/oxidoreductase inhibitor
Keywords: Complex II, membrane protein, heme protein, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR complex
Deposited on 2018-11-02, released 2019-10-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-07-07, with a file datestamp of 2021-07-02.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6myrb1, d6myrb2
  • Chain 'C':
    Compound: Succinate dehydrogenase cytochrome B, large subunit
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • Uniprot D0VWW3 (0-139)
      • conflict (138-139)
  • Chain 'D':
    Compound: Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6myrd_
  • Heterogens: K7G, FAD, OAA, K, PEG, UNL, FES, SF4, F3S, HEM, UMQ, BOG, 3PE, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6myrB (B:)
aqtaaaatsrikkfsiyrwdpdkpgdkprmqtyevdlnkcgpmvldalikikneldstlt
frrscregicgscamniaggntlactkkidpdlskttkiyplphmyvvkdlvpdlsnfya
qyksiepylkkkdeskqgkeqylqsiedrqkldglyecilcaccstscpsywwngdkylg
pavlmqayrwmidsrddyteerlaqlqdpfslyrchtimnctrtcpkglnpgkaiaeikk
mmatykekaaaa

    Sequence, based on observed residues (ATOM records): (download) 
    >6myrB (B:)
tsrikkfsiyrwdpdkpgdkprmqtyevdlnkcgpmvldalikikneldstltfrrscre
gicgscamniaggntlactkkidpdlskttkiyplphmyvvkdlvpdlsnfyaqyksiep
ylkkkdeskqgkeqylqsiedrqkldglyecilcaccstscpsywwngdkylgpavlmqa
yrwmidsrddyteerlaqlqdpfslyrchtimnctrtcpkglnpgkaiaeikkmmatyke

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6myrD (D:)
gsskaaslhwtseravsalllgllpaaylypgpavdyslaaaltlhghwglgqvitdyvh
gdtpikvantglyvlsaitftglcyfnyydvgickavamlwsi

    Sequence, based on observed residues (ATOM records): (download) 
    >6myrD (D:)
sskaaslhwtseravsalllgllpaaylypgpavdyslaaaltlhghwglgqvitdyvhg
dtpikvantglyvlsaitftglcyfnyydvgickavamlwsi