PDB entry 6mx2

View 6mx2 on RCSB PDB site
Description: Crystal Structure of ClpP1 from Clostridium difficile 630.
Class: hydrolase
Keywords: Casinolytic protease Tetradecamer Clostridium difficule, HYDROLASE
Deposited on 2018-10-30, released 2018-11-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2a_
  • Chain 'B':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2b_
  • Chain 'C':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2c_
  • Chain 'D':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2d_
  • Chain 'E':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2e_
  • Chain 'F':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2f_
  • Chain 'G':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2g_
  • Chain 'H':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2h_
  • Chain 'I':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2i_
  • Chain 'J':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2j_
  • Chain 'K':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2k_
  • Chain 'L':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2l_
  • Chain 'M':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2m_
  • Chain 'N':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Clostridioides difficile 630 [TaxId:272563]
    Gene: clpP1, clpP, CD630_33050
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6mx2n_
  • Heterogens: NA, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6mx2A (A:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2A (A:)
vpvvrsydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggsi
tsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaqg
qatdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevft
kr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6mx2B (B:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2B (B:)
alvpvversydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspg
gsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplgg
aqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglide
vftkr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6mx2C (C:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2C (C:)
lvpvydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggsits
gmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaqgqa
tdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevftkr
p

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6mx2D (D:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2D (D:)
vpvvydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggsits
gmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaqgqa
tdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevftkr
p

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6mx2E (E:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2E (E:)
vpvvsydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggsit
sgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaqgq
atdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevftk
rp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6mx2F (F:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2F (F:)
lvpvvsydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggsi
tsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaqg
qatdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevft
krp

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6mx2G (G:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2G (G:)
lvpvvsydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggsi
tsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaqg
qatdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevft
krp

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6mx2H (H:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2H (H:)
lvpvvydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggsit
sgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaqgq
atdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevftk
r

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >6mx2I (I:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2I (I:)
alvpydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggsits
gmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaqgqa
tdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevftkr

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >6mx2J (J:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2J (J:)
alvpvvveqrsydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyins
pggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqpl
ggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeygli
devftkr

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >6mx2K (K:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2K (K:)
vpvvsydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggsit
sgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaqgq
atdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevftk
rp

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6mx2L (L:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2L (L:)
lvpvvvsydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggs
itsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaq
gqatdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevf
tkr

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >6mx2M (M:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2M (M:)
vpvvsydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggsit
sgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaqgq
atdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevftk
r

  • Chain 'N':
    Sequence, based on SEQRES records: (download) 
    >6mx2N (N:)
malvpvvveqtgrgersydifsrllkdriiflgdqvndataglivaqllfleaedpdkdi
hlyinspggsitsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnsei
mihqplggaqgqatdieihakrilkiketlneilsertgqplekikmdterdnfmsalea
keyglidevftkrp

    Sequence, based on observed residues (ATOM records): (download) 
    >6mx2N (N:)
alvpvsydifsrllkdriiflgdqvndataglivaqllfleaedpdkdihlyinspggsi
tsgmaiydtmqyikpdvsticigmaasmgafllaagakgkrlalpnseimihqplggaqg
qatdieihakrilkiketlneilsertgqplekikmdterdnfmsaleakeyglidevft