PDB entry 6mvf

View 6mvf on RCSB PDB site
Description: crystal structure of fmn-binding beta-glucuronidase from facaelibacterium prausnitzii l2-6
Deposited on 2018-10-25, released 2019-01-30
The last revision was dated 2019-12-04, with a file datestamp of 2019-11-29.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-galactosidase/beta-glucuronidase
    Species: Faecalibacterium prausnitzii L2-6 [TaxId:718252]
    Gene: FP2_04120
    Database cross-references and differences (RAF-indexed):
    • Uniprot D4K3H3 (23-End)
      • expression tag (21-22)
  • Chain 'B':
    Compound: Beta-galactosidase/beta-glucuronidase
    Species: Faecalibacterium prausnitzii L2-6 [TaxId:718252]
    Gene: FP2_04120
    Database cross-references and differences (RAF-indexed):
    • Uniprot D4K3H3 (23-End)
      • expression tag (21-22)
  • Chain 'C':
    Compound: Beta-galactosidase/beta-glucuronidase
    Species: Faecalibacterium prausnitzii L2-6 [TaxId:718252]
    Gene: FP2_04120
    Database cross-references and differences (RAF-indexed):
    • Uniprot D4K3H3 (23-End)
      • expression tag (21-22)
  • Chain 'D':
    Compound: Beta-galactosidase/beta-glucuronidase
    Species: Faecalibacterium prausnitzii L2-6 [TaxId:718252]
    Gene: FP2_04120
    Database cross-references and differences (RAF-indexed):
    • Uniprot D4K3H3 (23-End)
      • expression tag (21-22)
  • Chain 'E':
    Compound: Beta-galactosidase/beta-glucuronidase
    Species: Faecalibacterium prausnitzii L2-6 [TaxId:718252]
    Gene: FP2_04120
    Database cross-references and differences (RAF-indexed):
    • Uniprot D4K3H3 (23-End)
      • expression tag (21-22)
  • Chain 'F':
    Compound: Beta-galactosidase/beta-glucuronidase
    Species: Faecalibacterium prausnitzii L2-6 [TaxId:718252]
    Gene: FP2_04120
    Database cross-references and differences (RAF-indexed):
    • Uniprot D4K3H3 (23-End)
      • expression tag (21-22)
  • Heterogens: FMN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6mvfA (A:)
hhhhhhssgvdlgtenlyfqsnamreiislnegwtlrfpkgeraaetvtlphtwnavdgm
dgngsylrttgvysrtfkkpvqpltggrvyvevlaaaldatvkvngtvattheggfsifr
aditdlcrdgdneltievsnedtpsmypasadftfygglyrgvnlisvpnahfdldyygg
pgimvtpkptadggatfeiksfvtnpddsftvmysiedpygcevasavrpsdntaisiyv
pdaelwsmdepnlytvvarlqrnneafdeiyanvgvrsytvtpdggfsingeatplrgvs
rhqdklykgnaltvedhyqdaqiikelgantirlahyqhsqdfydacdelgfavwaeipf
isvfksgkdahthvmeemkeliiqnynhpsilfwgisneiliggisqelvdthhdlqklc
keldptrlttiahvshtptsgpmhritdvesynhyfgwyggkieqngpwldkfhaenpdi
clgiseygcegiinwhsntpqckdyseeyqalyheymaqafedrpwiwashvwnmfdfgc
aarseggvkgrnnkglvtidrktrkdsfyvyqaywakdpmvhiagrrhaqragettevkv
ysnqdtvtlycngkevgtqtahrvfkfdvaldegfnvlmavadtvkdsitlekvetepac
ytlpefnerqegvanwfkqmgsmdltapmefpegyysikdsleelakneeafavtakavk
latnfdikpgegmwgmmkkmtpevmagmisimpdgfieslnaklikikk

    Sequence, based on observed residues (ATOM records):
    >6mvfA (A:)
namreiislnegwtlrfpkgeraaetvtlphtwnavdgmdgngsylrttgvysrtfkkpv
qpltggrvyvevlaaaldatvkvngtvattheggfsifraditdlcrdgdneltievsne
dtpsmypasadftfygglyrgvnlisvpnahfdldyyggpgimvtpkptadggatfeiks
fvtnpddsftvmysiedpygcevasavrpsdntaisiyvpdaelwsmdepnlytvvarlq
rnneafdeiyanvgvrsytvtpdggfsingeatplrgvsrhqdklykgnaltvedhyqda
qiikelgantirlahyqhsqdfydacdelgfavwaeipfisvfksgkdahthvmeemkel
iiqnynhpsilfwgisneiliggisqelvdthhdlqklckeldptrlttiahvshtptsg
pmhritdvesynhyfgwyggkieqngpwldkfhaenpdiclgiseygcegiinwhsntpq
ckdyseeyqalyheymaqafedrpwiwashvwnmfdfgcaarseggvkgrnnkglvtidr
ktrkdsfyvyqaywakdpmvhiagrrhaqragettevkvysnqdtvtlycngkevgtqta
hrvfkfdvaldegfnvlmavadtvkdsitlekvetepacytlp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6mvfB (B:)
hhhhhhssgvdlgtenlyfqsnamreiislnegwtlrfpkgeraaetvtlphtwnavdgm
dgngsylrttgvysrtfkkpvqpltggrvyvevlaaaldatvkvngtvattheggfsifr
aditdlcrdgdneltievsnedtpsmypasadftfygglyrgvnlisvpnahfdldyygg
pgimvtpkptadggatfeiksfvtnpddsftvmysiedpygcevasavrpsdntaisiyv
pdaelwsmdepnlytvvarlqrnneafdeiyanvgvrsytvtpdggfsingeatplrgvs
rhqdklykgnaltvedhyqdaqiikelgantirlahyqhsqdfydacdelgfavwaeipf
isvfksgkdahthvmeemkeliiqnynhpsilfwgisneiliggisqelvdthhdlqklc
keldptrlttiahvshtptsgpmhritdvesynhyfgwyggkieqngpwldkfhaenpdi
clgiseygcegiinwhsntpqckdyseeyqalyheymaqafedrpwiwashvwnmfdfgc
aarseggvkgrnnkglvtidrktrkdsfyvyqaywakdpmvhiagrrhaqragettevkv
ysnqdtvtlycngkevgtqtahrvfkfdvaldegfnvlmavadtvkdsitlekvetepac
ytlpefnerqegvanwfkqmgsmdltapmefpegyysikdsleelakneeafavtakavk
latnfdikpgegmwgmmkkmtpevmagmisimpdgfieslnaklikikk

    Sequence, based on observed residues (ATOM records):
    >6mvfB (B:)
namreiislnegwtlrfpkgeraaetvtlphtwnavdgmdgngsylrttgvysrtfkkpv
qpltggrvyvevlaaaldatvkvngtvattheggfsifraditdlcrdgdneltievsne
dtpsmypasadftfygglyrgvnlisvpnahfdldyyggpgimvtpkptadggatfeiks
fvtnpddsftvmysiedpygcevasavrpsdntaisiyvpdaelwsmdepnlytvvarlq
rnneafdeiyanvgvrsytvtpdggfsingeatplrgvsrhqdklykgnaltvedhyqda
qiikelgantirlahyqhsqdfydacdelgfavwaeipfisvfksgkdahthvmeemkel
iiqnynhpsilfwgisneiliggisqelvdthhdlqklckeldptrlttiahvshtptsg
pmhritdvesynhyfgwyggkieqngpwldkfhaenpdiclgiseygcegiinwhsntpq
ckdyseeyqalyheymaqafedrpwiwashvwnmfdfgcaarseggvkgrnnkglvtidr
ktrkdsfyvyqaywakdpmvhiagrrhaqragettevkvysnqdtvtlycngkevgtqta
hrvfkfdvaldegfnvlmavadtvkdsitlekvetepacytlp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6mvfC (C:)
hhhhhhssgvdlgtenlyfqsnamreiislnegwtlrfpkgeraaetvtlphtwnavdgm
dgngsylrttgvysrtfkkpvqpltggrvyvevlaaaldatvkvngtvattheggfsifr
aditdlcrdgdneltievsnedtpsmypasadftfygglyrgvnlisvpnahfdldyygg
pgimvtpkptadggatfeiksfvtnpddsftvmysiedpygcevasavrpsdntaisiyv
pdaelwsmdepnlytvvarlqrnneafdeiyanvgvrsytvtpdggfsingeatplrgvs
rhqdklykgnaltvedhyqdaqiikelgantirlahyqhsqdfydacdelgfavwaeipf
isvfksgkdahthvmeemkeliiqnynhpsilfwgisneiliggisqelvdthhdlqklc
keldptrlttiahvshtptsgpmhritdvesynhyfgwyggkieqngpwldkfhaenpdi
clgiseygcegiinwhsntpqckdyseeyqalyheymaqafedrpwiwashvwnmfdfgc
aarseggvkgrnnkglvtidrktrkdsfyvyqaywakdpmvhiagrrhaqragettevkv
ysnqdtvtlycngkevgtqtahrvfkfdvaldegfnvlmavadtvkdsitlekvetepac
ytlpefnerqegvanwfkqmgsmdltapmefpegyysikdsleelakneeafavtakavk
latnfdikpgegmwgmmkkmtpevmagmisimpdgfieslnaklikikk

    Sequence, based on observed residues (ATOM records):
    >6mvfC (C:)
namreiislnegwtlrfpkgeraaetvtlphtwnavdgmdgngsylrttgvysrtfkkpv
qpltggrvyvevlaaaldatvkvngtvattheggfsifraditdlcrdgdneltievsne
dtpsmypasadftfygglyrgvnlisvpnahfdldyyggpgimvtpkptadggatfeiks
fvtnpddsftvmysiedpygcevasavrpsdntaisiyvpdaelwsmdepnlytvvarlq
rnneafdeiyanvgvrsytvtpdggfsingeatplrgvsrhqdklykgnaltvedhyqda
qiikelgantirlahyqhsqdfydacdelgfavwaeipfisvfksgkdahthvmeemkel
iiqnynhpsilfwgisneiliggisqelvdthhdlqklckeldptrlttiahvshtptsg
pmhritdvesynhyfgwyggkieqngpwldkfhaenpdiclgiseygcegiinwhsntpq
ckdyseeyqalyheymaqafedrpwiwashvwnmfdfgcaarseggvkgrnnkglvtidr
ktrkdsfyvyqaywakdpmvhiagrrhaqragettevkvysnqdtvtlycngkevgtqta
hrvfkfdvaldegfnvlmavadtvkdsitlekvetepacytlp

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6mvfD (D:)
hhhhhhssgvdlgtenlyfqsnamreiislnegwtlrfpkgeraaetvtlphtwnavdgm
dgngsylrttgvysrtfkkpvqpltggrvyvevlaaaldatvkvngtvattheggfsifr
aditdlcrdgdneltievsnedtpsmypasadftfygglyrgvnlisvpnahfdldyygg
pgimvtpkptadggatfeiksfvtnpddsftvmysiedpygcevasavrpsdntaisiyv
pdaelwsmdepnlytvvarlqrnneafdeiyanvgvrsytvtpdggfsingeatplrgvs
rhqdklykgnaltvedhyqdaqiikelgantirlahyqhsqdfydacdelgfavwaeipf
isvfksgkdahthvmeemkeliiqnynhpsilfwgisneiliggisqelvdthhdlqklc
keldptrlttiahvshtptsgpmhritdvesynhyfgwyggkieqngpwldkfhaenpdi
clgiseygcegiinwhsntpqckdyseeyqalyheymaqafedrpwiwashvwnmfdfgc
aarseggvkgrnnkglvtidrktrkdsfyvyqaywakdpmvhiagrrhaqragettevkv
ysnqdtvtlycngkevgtqtahrvfkfdvaldegfnvlmavadtvkdsitlekvetepac
ytlpefnerqegvanwfkqmgsmdltapmefpegyysikdsleelakneeafavtakavk
latnfdikpgegmwgmmkkmtpevmagmisimpdgfieslnaklikikk

    Sequence, based on observed residues (ATOM records):
    >6mvfD (D:)
namreiislnegwtlrfpkgeraaetvtlphtwnavdgmdgngsylrttgvysrtfkkpv
qpltggrvyvevlaaaldatvkvngtvattheggfsifraditdlcrdgdneltievsne
dtpsmypasadftfygglyrgvnlisvpnahfdldyyggpgimvtpkptadggatfeiks
fvtnpddsftvmysiedpygcevasavrpsdntaisiyvpdaelwsmdepnlytvvarlq
rnneafdeiyanvgvrsytvtpdggfsingeatplrgvsrhqdklykgnaltvedhyqda
qiikelgantirlahyqhsqdfydacdelgfavwaeipfisvfksgkdahthvmeemkel
iiqnynhpsilfwgisneiliggisqelvdthhdlqklckeldptrlttiahvshtptsg
pmhritdvesynhyfgwyggkieqngpwldkfhaenpdiclgiseygcegiinwhsntpq
ckdyseeyqalyheymaqafedrpwiwashvwnmfdfgcaarseggvkgrnnkglvtidr
ktrkdsfyvyqaywakdpmvhiagrrhaqragettevkvysnqdtvtlycngkevgtqta
hrvfkfdvaldegfnvlmavadtvkdsitlekvetepacytlp

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6mvfE (E:)
hhhhhhssgvdlgtenlyfqsnamreiislnegwtlrfpkgeraaetvtlphtwnavdgm
dgngsylrttgvysrtfkkpvqpltggrvyvevlaaaldatvkvngtvattheggfsifr
aditdlcrdgdneltievsnedtpsmypasadftfygglyrgvnlisvpnahfdldyygg
pgimvtpkptadggatfeiksfvtnpddsftvmysiedpygcevasavrpsdntaisiyv
pdaelwsmdepnlytvvarlqrnneafdeiyanvgvrsytvtpdggfsingeatplrgvs
rhqdklykgnaltvedhyqdaqiikelgantirlahyqhsqdfydacdelgfavwaeipf
isvfksgkdahthvmeemkeliiqnynhpsilfwgisneiliggisqelvdthhdlqklc
keldptrlttiahvshtptsgpmhritdvesynhyfgwyggkieqngpwldkfhaenpdi
clgiseygcegiinwhsntpqckdyseeyqalyheymaqafedrpwiwashvwnmfdfgc
aarseggvkgrnnkglvtidrktrkdsfyvyqaywakdpmvhiagrrhaqragettevkv
ysnqdtvtlycngkevgtqtahrvfkfdvaldegfnvlmavadtvkdsitlekvetepac
ytlpefnerqegvanwfkqmgsmdltapmefpegyysikdsleelakneeafavtakavk
latnfdikpgegmwgmmkkmtpevmagmisimpdgfieslnaklikikk

    Sequence, based on observed residues (ATOM records):
    >6mvfE (E:)
namreiislnegwtlrfpkgeraaetvtlphtwnavdgmdgngsylrttgvysrtfkkpv
qpltggrvyvevlaaaldatvkvngtvattheggfsifraditdlcrdgdneltievsne
dtpsmypasadftfygglyrgvnlisvpnahfdldyyggpgimvtpkptadggatfeiks
fvtnpddsftvmysiedpygcevasavrpsdntaisiyvpdaelwsmdepnlytvvarlq
rnneafdeiyanvgvrsytvtpdggfsingeatplrgvsrhqdklykgnaltvedhyqda
qiikelgantirlahyqhsqdfydacdelgfavwaeipfisvfksgkdahthvmeemkel
iiqnynhpsilfwgisneiliggisqelvdthhdlqklckeldptrlttiahvshtptsg
pmhritdvesynhyfgwyggkieqngpwldkfhaenpdiclgiseygcegiinwhsntpq
ckdyseeyqalyheymaqafedrpwiwashvwnmfdfgcaarseggvkgrnnkglvtidr
ktrkdsfyvyqaywakdpmvhiagrrhaqragettevkvysnqdtvtlycngkevgtqta
hrvfkfdvaldegfnvlmavadtvkdsitlekvetepacytlp

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6mvfF (F:)
hhhhhhssgvdlgtenlyfqsnamreiislnegwtlrfpkgeraaetvtlphtwnavdgm
dgngsylrttgvysrtfkkpvqpltggrvyvevlaaaldatvkvngtvattheggfsifr
aditdlcrdgdneltievsnedtpsmypasadftfygglyrgvnlisvpnahfdldyygg
pgimvtpkptadggatfeiksfvtnpddsftvmysiedpygcevasavrpsdntaisiyv
pdaelwsmdepnlytvvarlqrnneafdeiyanvgvrsytvtpdggfsingeatplrgvs
rhqdklykgnaltvedhyqdaqiikelgantirlahyqhsqdfydacdelgfavwaeipf
isvfksgkdahthvmeemkeliiqnynhpsilfwgisneiliggisqelvdthhdlqklc
keldptrlttiahvshtptsgpmhritdvesynhyfgwyggkieqngpwldkfhaenpdi
clgiseygcegiinwhsntpqckdyseeyqalyheymaqafedrpwiwashvwnmfdfgc
aarseggvkgrnnkglvtidrktrkdsfyvyqaywakdpmvhiagrrhaqragettevkv
ysnqdtvtlycngkevgtqtahrvfkfdvaldegfnvlmavadtvkdsitlekvetepac
ytlpefnerqegvanwfkqmgsmdltapmefpegyysikdsleelakneeafavtakavk
latnfdikpgegmwgmmkkmtpevmagmisimpdgfieslnaklikikk

    Sequence, based on observed residues (ATOM records):
    >6mvfF (F:)
namreiislnegwtlrfpkgeraaetvtlphtwnavdgmdgngsylrttgvysrtfkkpv
qpltggrvyvevlaaaldatvkvngtvattheggfsifraditdlcrdgdneltievsne
dtpsmypasadftfygglyrgvnlisvpnahfdldyyggpgimvtpkptadggatfeiks
fvtnpddsftvmysiedpygcevasavrpsdntaisiyvpdaelwsmdepnlytvvarlq
rnneafdeiyanvgvrsytvtpdggfsingeatplrgvsrhqdklykgnaltvedhyqda
qiikelgantirlahyqhsqdfydacdelgfavwaeipfisvfksgkdahthvmeemkel
iiqnynhpsilfwgisneiliggisqelvdthhdlqklckeldptrlttiahvshtptsg
pmhritdvesynhyfgwyggkieqngpwldkfhaenpdiclgiseygcegiinwhsntpq
ckdyseeyqalyheymaqafedrpwiwashvwnmfdfgcaarseggvkgrnnkglvtidr
ktrkdsfyvyqaywakdpmvhiagrrhaqragettevkvysnqdtvtlycngkevgtqta
hrvfkfdvaldegfnvlmavadtvkdsitlekvetepacytlp