PDB entry 6mlm

View 6mlm on RCSB PDB site
Description: h7 ha0 in complex with fv from h7.5 igg
Deposited on 2018-09-27, released 2019-02-20
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: EM
Resolution: 3.5 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus (A/New York/107/2003(H7N2)) [TaxId:519082]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus (A/New York/107/2003(H7N2)) [TaxId:519082]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus [TaxId:519082]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus [TaxId:519082]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Heavy chain Fv of H7.5 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6MLM (0-End)
  • Chain 'F':
    Compound: Heavy chain Fv of H7.5 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6MLM (0-End)
  • Chain 'G':
    Compound: Light chain Fv of H7.5 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6MLM (0-End)
  • Chain 'H':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus (A/New York/107/2003(H7N2)) [TaxId:519082]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Light chain Fv of H7.5 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6MLM (0-End)
  • Chain 'J':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus [TaxId:519082]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Heavy chain Fv of H7.5 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6MLM (0-End)
  • Chain 'L':
    Compound: Light chain Fv of H7.5 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6MLM (0-End)
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6mlmA (A:)
mntqilafiacvltgvkgdkiclghhavangtkvntltergievvnatetvettnikkic
tqgkrptdlgqcgllgtligppqcdqflefssdliierregtdicypgrftneeslrqil
rrsggigkesmgftysgirtngatsactrsgssfyaemkwllsnsdnaafpqmtkayrnp
rnkpaliiwgvhhsesvseqtklygsgnklitvrsskyqqsftpnpgarridfhwllldp
ndtvtftfngafiapdrtsffrgeslgvqsdapldsscrgdcfhsggtivsslpfqnins
rtvgkcpryvkqkslllatgmrnvpekp

    Sequence, based on observed residues (ATOM records):
    >6mlmA (A:)
gdkiclghhavangtkvntltergievvnatetvettnikkictqgkrptdlgqcgllgt
ligppqcdqflefssdliierregtdicypgrftneeslrqilrrsggigkesmgftysg
irtngatsactrsgssfyaemkwllsnsdnaafpqmtkayrnprnkpaliiwgvhhsesv
seqtklygsgnklitvrsskyqqsftpnpgarridfhwllldpndtvtftfngafiapdr
tsffrgeslgvqsdapldsscrgdcfhsggtivsslpfqninsrtvgkcpryvkqkslll
atgmrnvpekp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6mlmB (B:)
mntqilafiacvltgvkgdkiclghhavangtkvntltergievvnatetvettnikkic
tqgkrptdlgqcgllgtligppqcdqflefssdliierregtdicypgrftneeslrqil
rrsggigkesmgftysgirtngatsactrsgssfyaemkwllsnsdnaafpqmtkayrnp
rnkpaliiwgvhhsesvseqtklygsgnklitvrsskyqqsftpnpgarridfhwllldp
ndtvtftfngafiapdrtsffrgeslgvqsdapldsscrgdcfhsggtivsslpfqnins
rtvgkcpryvkqkslllatgmrnvpekp

    Sequence, based on observed residues (ATOM records):
    >6mlmB (B:)
gdkiclghhavangtkvntltergievvnatetvettnikkictqgkrptdlgqcgllgt
ligppqcdqflefssdliierregtdicypgrftneeslrqilrrsggigkesmgftysg
irtngatsactrsgssfyaemkwllsnsdnaafpqmtkayrnprnkpaliiwgvhhsesv
seqtklygsgnklitvrsskyqqsftpnpgarridfhwllldpndtvtftfngafiapdr
tsffrgeslgvqsdapldsscrgdcfhsggtivsslpfqninsrtvgkcpryvkqkslll
atgmrnvpekp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6mlmC (C:)
kprglfgaiagfiengweglingwygfrhqnaqgegtaadykstqsaidqitgklnrlig
ktnqqfelidnefneieqqignvinwtrdamteiwsynaellvamenqhtidladsemsk
lyervkkqlrenaeedgtgcfeifhkcddqcmesirnntydhtqyrteslqnriqidpvk
lssgykdiilwfsfgascflllaiamglvficikngnmqctici

    Sequence, based on observed residues (ATOM records):
    >6mlmC (C:)
agfiengweglingwygfrhqnaqgegtaadykstqsaidqitgklnrligktnqqfeli
dnefneieqqignvinwtrdamteiwsynaellvamenqhtidladsemsklyervkkql
renaeedgtgcfeifhkcddqcmesirnntydhtqyrteslqnriqid

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6mlmD (D:)
kprglfgaiagfiengweglingwygfrhqnaqgegtaadykstqsaidqitgklnrlig
ktnqqfelidnefneieqqignvinwtrdamteiwsynaellvamenqhtidladsemsk
lyervkkqlrenaeedgtgcfeifhkcddqcmesirnntydhtqyrteslqnriqidpvk
lssgykdiilwfsfgascflllaiamglvficikngnmqctici

    Sequence, based on observed residues (ATOM records):
    >6mlmD (D:)
agfiengweglingwygfrhqnaqgegtaadykstqsaidqitgklnrligktnqqfeli
dnefneieqqignvinwtrdamteiwsynaellvamenqhtidladsemsklyervkkql
renaeedgtgcfeifhkcddqcmesirnntydhtqyrteslqnriqid

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6mlmE (E:)
vqlvqsgaevkkpgasvkvsckasgytltryyfhwvrqapgqgfewmgiinpngggtsya
qkfgdrvimtsdmststiymelsslrsedtavyycardmpyyhdsggplfdlwgqgtlvt
vssastkgpsvfplapsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk

    Sequence, based on observed residues (ATOM records):
    >6mlmE (E:)
vqlvqsgaevkkpgasvkvsckasgytltryyfhwvrqapgqgfewmgiinpngggtsya
qkfgdrvimtsdmststiymelsslrsedtavyycardmpyyhdsggplfdlwgqgtlvt
vs

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6mlmF (F:)
vqlvqsgaevkkpgasvkvsckasgytltryyfhwvrqapgqgfewmgiinpngggtsya
qkfgdrvimtsdmststiymelsslrsedtavyycardmpyyhdsggplfdlwgqgtlvt
vssastkgpsvfplapsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk

    Sequence, based on observed residues (ATOM records):
    >6mlmF (F:)
vqlvqsgaevkkpgasvkvsckasgytltryyfhwvrqapgqgfewmgiinpngggtsya
qkfgdrvimtsdmststiymelsslrsedtavyycardmpyyhdsggplfdlwgqgtlvt
vs

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6mlmG (G:)
eivmtqspsslsasvgdrvtitcrpsqsistflnwyeqkpgkapklliydasslqsgvps
rfsgsgsgteftltisslqpedfatyycqqsfstpytfgqgtrleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge

    Sequence, based on observed residues (ATOM records):
    >6mlmG (G:)
eivmtqspsslsasvgdrvtitcrpsqsistflnwyeqkpgkapklliydasslqsgvps
rfsgsgsgteftltisslqpedfatyycqqsfstpytfgqgtrlei

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6mlmH (H:)
mntqilafiacvltgvkgdkiclghhavangtkvntltergievvnatetvettnikkic
tqgkrptdlgqcgllgtligppqcdqflefssdliierregtdicypgrftneeslrqil
rrsggigkesmgftysgirtngatsactrsgssfyaemkwllsnsdnaafpqmtkayrnp
rnkpaliiwgvhhsesvseqtklygsgnklitvrsskyqqsftpnpgarridfhwllldp
ndtvtftfngafiapdrtsffrgeslgvqsdapldsscrgdcfhsggtivsslpfqnins
rtvgkcpryvkqkslllatgmrnvpekp

    Sequence, based on observed residues (ATOM records):
    >6mlmH (H:)
gdkiclghhavangtkvntltergievvnatetvettnikkictqgkrptdlgqcgllgt
ligppqcdqflefssdliierregtdicypgrftneeslrqilrrsggigkesmgftysg
irtngatsactrsgssfyaemkwllsnsdnaafpqmtkayrnprnkpaliiwgvhhsesv
seqtklygsgnklitvrsskyqqsftpnpgarridfhwllldpndtvtftfngafiapdr
tsffrgeslgvqsdapldsscrgdcfhsggtivsslpfqninsrtvgkcpryvkqkslll
atgmrnvpekp

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6mlmI (I:)
eivmtqspsslsasvgdrvtitcrpsqsistflnwyeqkpgkapklliydasslqsgvps
rfsgsgsgteftltisslqpedfatyycqqsfstpytfgqgtrleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge

    Sequence, based on observed residues (ATOM records):
    >6mlmI (I:)
eivmtqspsslsasvgdrvtitcrpsqsistflnwyeqkpgkapklliydasslqsgvps
rfsgsgsgteftltisslqpedfatyycqqsfstpytfgqgtrlei

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6mlmJ (J:)
kprglfgaiagfiengweglingwygfrhqnaqgegtaadykstqsaidqitgklnrlig
ktnqqfelidnefneieqqignvinwtrdamteiwsynaellvamenqhtidladsemsk
lyervkkqlrenaeedgtgcfeifhkcddqcmesirnntydhtqyrteslqnriqidpvk
lssgykdiilwfsfgascflllaiamglvficikngnmqctici

    Sequence, based on observed residues (ATOM records):
    >6mlmJ (J:)
agfiengweglingwygfrhqnaqgegtaadykstqsaidqitgklnrligktnqqfeli
dnefneieqqignvinwtrdamteiwsynaellvamenqhtidladsemsklyervkkql
renaeedgtgcfeifhkcddqcmesirnntydhtqyrteslqnriqid

  • Chain 'K':
    Sequence, based on SEQRES records:
    >6mlmK (K:)
vqlvqsgaevkkpgasvkvsckasgytltryyfhwvrqapgqgfewmgiinpngggtsya
qkfgdrvimtsdmststiymelsslrsedtavyycardmpyyhdsggplfdlwgqgtlvt
vssastkgpsvfplapsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk

    Sequence, based on observed residues (ATOM records):
    >6mlmK (K:)
vqlvqsgaevkkpgasvkvsckasgytltryyfhwvrqapgqgfewmgiinpngggtsya
qkfgdrvimtsdmststiymelsslrsedtavyycardmpyyhdsggplfdlwgqgtlvt
vs

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6mlmL (L:)
eivmtqspsslsasvgdrvtitcrpsqsistflnwyeqkpgkapklliydasslqsgvps
rfsgsgsgteftltisslqpedfatyycqqsfstpytfgqgtrleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge

    Sequence, based on observed residues (ATOM records):
    >6mlmL (L:)
eivmtqspsslsasvgdrvtitcrpsqsistflnwyeqkpgkapklliydasslqsgvps
rfsgsgsgteftltisslqpedfatyycqqsfstpytfgqgtrlei