PDB entry 6mcb

View 6mcb on RCSB PDB site
Description: cryoem structure of acriia2 in complex with crispr-cas9
Deposited on 2018-08-31, released 2019-01-16
The last revision was dated 2019-11-20, with a file datestamp of 2019-11-15.
Experiment type: EM
Resolution: 3.4 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: CRISPR-associated endonuclease Cas9
    Species: Streptococcus pyogenes M1 GAS [TaxId:160490]
    Gene: cas9, M1GAS476_0830
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: single guide RNA (116-MER)
    Species: Streptococcus pyogenes M1 GAS [TaxId:160490]
  • Chain 'C':
    Compound: Anti-CRISPR protein AcrIIA2
    Species: Listeria phage LP-101 [TaxId:1458856]
    Database cross-references and differences (RAF-indexed):
    • PDB 6MCB (0-122)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6mcbA (A:)
    mdkkysigldigtnsvgwavitddykvpskkfkvlgntdrhsikknligallfdsgetae
    atrlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifg
    nivdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsd
    vdklfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgn
    lialslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdai
    llsdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngya
    gyidggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelh
    ailrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfee
    vvdkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpafl
    sgeqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllki
    ikdkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwg
    rlsrklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdsl
    hehianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenqttqkgqknsrer
    mkrieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdh
    ivpqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnl
    tkaergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlks
    klvsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrk
    miakseqeigkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdf
    atvrkvlsmpqvnivkktevqtggfskesilpkrnsdkliarkkdwdpkkyggfdsptva
    ysvlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpk
    yslfelengrkrmlasagelqkgnelalpskyvnflylashyeklkgspedneqkqlfve
    qhkhyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlga
    paafkyfdttidrkrytstkevldatlihqsitglyetridlsqlggd
    

    Sequence, based on observed residues (ATOM records):
    >6mcbA (A:)
    kkysigldigtnsvgwavitddykvpskkfkvlgntdrhsikknligallfdsgetaeat
    rlkrtarrrytrrknricylqeifsnemakvddsffhrleesflveedkkherhpifgni
    vdevayhekyptiyhlrkklvdstdkadlrliylalahmikfrghfliegdlnpdnsdvd
    klfiqlvqtynqlfeenpinasgvdakailsarlsksrrlenliaqlpgekknglfgnli
    alslgltpnfksnfdlaedaklqlskdtydddldnllaqigdqyadlflaaknlsdaill
    sdilrvnteitkaplsasmikrydehhqdltllkalvrqqlpekykeiffdqskngyagy
    idggasqeefykfikpilekmdgteellvklnredllrkqrtfdngsiphqihlgelhai
    lrrqedfypflkdnrekiekiltfripyyvgplargnsrfawmtrkseetitpwnfeevv
    dkgasaqsfiermtnfdknlpnekvlpkhsllyeyftvyneltkvkyvtegmrkpaflsg
    eqkkaivdllfktnrkvtvkqlkedyfkkiecfdsveisgvedrfnaslgtyhdllkiik
    dkdfldneenediledivltltlfedremieerlktyahlfddkvmkqlkrrrytgwgrl
    srklingirdkqsgktildflksdgfanrnfmqlihddsltfkediqkaqvsgqgdslhe
    hianlagspaikkgilqtvkvvdelvkvmgrhkpeniviemarenqttqkgqknsrermk
    rieegikelgsqilkehpventqlqneklylyylqngrdmyvdqeldinrlsdydvdhiv
    pqsflkddsidnkvltrsdknrgksdnvpseevvkkmknywrqllnaklitqrkfdnltk
    aergglseldkagfikrqlvetrqitkhvaqildsrmntkydendklirevkvitlkskl
    vsdfrkdfqfykvreinnyhhahdaylnavvgtalikkypklesefvygdykvydvrkmi
    akseqeigkatakyffysnimnffkteitlangeirkrplietngetgeivwdkgrdfat
    vrkvlsmpqvnivkktevqtggfskesilpkrnsdkliarkkdwdpkkyggfdsptvays
    vlvvakvekgkskklksvkellgitimerssfeknpidfleakgykevkkdliiklpkys
    lfelengrkrmlasagelqkgnelalpskyvnflylashyeklkgspedneqkqlfveqh
    khyldeiieqisefskrviladanldkvlsaynkhrdkpireqaeniihlftltnlgapa
    afkyfdttidrkrytstkevldatlihqsitglyetridlsqlg
    

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6mcbC (C:)
    mtltraqkkyaeamhefinmvddfeestpdfakevlhdsdyvvitknekyavalcslstd
    eceydtnlyldeklvdystvdvngvtyyinivetndiddleiatdedemksgnqeiilks
    elk