PDB entry 6m0v

View 6m0v on RCSB PDB site
Description: crsytal structure of streptococcus thermophilus cas9 in complex with the ggaa pam
Deposited on 2020-02-22, released 2020-09-09
The last revision was dated 2020-09-09, with a file datestamp of 2020-09-04.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: CRISPR-associated endonuclease Cas9 1
    Species: Streptococcus thermophilus LMD-9 [TaxId:322159]
    Gene: cas9-1, csn1, STER_0709
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q03LF7 (2-1121)
      • initiating methionine (0)
      • expression tag (1)
      • engineered mutation (599)
  • Chain 'B':
    Compound: RNA (71-mer)
    Species: Streptococcus thermophilus, synthetic [TaxId:1308]
  • Chain 'C':
    Compound: DNA (28-mer)
    Species: Streptococcus thermophilus, synthetic [TaxId:1308]
  • Chain 'D':
    Compound: DNA (5'-d(*ap*ap*gp*gp*ap*ap*gp*c)-3')
    Species: Streptococcus thermophilus, synthetic [TaxId:1308]
  • Heterogens: BA, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6m0vA (A:)
mgsdlvlgldigigsvgvgilnkvtgeiihknsrifpaaqaennlvrrtnrqgrrlarrk
khrrvrlnrlfeesglitdftkisinlnpyqlrvkgltdelsneelfialknmvkhrgis
ylddasddgnssvgdyaqivkenskqletktpgqiqleryqtygqlrgdftvekdgkkhr
linvfptsayrsealrilqtqqefnpqitdefinryleiltgkrkyyhgpgneksrtdyg
ryrtsgetldnifgiligkctfypdefraakasytaqefnllndlnnltvptetkklske
qknqiinyvknekamgpaklfkyiakllscdvadikgyridksgkaeihtfeayrkmktl
etldieqmdretldklayvltlnteregiqealehefadgsfsqkqvdelvqfrkanssi
fgkgwhnfsvklmmelipelyetseeqmtiltrlgkqkttsssnktkyidekllteeiyn
pvvaksvrqaikivnaaikeygdfdniviemaretneddekkaiqkiqkankdekdaaml
kaanqyngkaelphsvfhghkqlatkirlwhqqgerclytgktisihdlinnsnqfevda
ilplsitfddslankvlvyatanqekgqrtpyqaldsmddawsfrelkafvresktlsnk
kkeyllteediskfdvrkkfiernlvdtryasrvvlnalqehfrahkidtkvsvvrgqft
sqlrrhwgiektrdtyhhhavdaliiaassqlnlwkkqkntlvsysedqlldietgelis
ddeykesvfkapyqhfvdtlkskefedsilfsyqvdskfnrkisdatiyatrqakvgkdk
adetyvlgkikdiytqdgydafmkiykkdkskflmyrhdpqtfekviepilenypnkqin
ekgkevpcnpflkykeehgyirkyskkgngpeikslkyydsklgnhiditpkdsnnkvvl
qsvspwradvyfnkttgkyeilglkyadlqfekgtgtykisqekyndikkkegvdsdsef
kftlykndlllvkdtetkeqqlfrflsrtmpkqkhyvelkpydkqkfeggealikvlgnv
ansgqckkglgksnisiykvrtdvlgnqhiiknegdkpkldf

    Sequence, based on observed residues (ATOM records):
    >6m0vA (A:)
mgsdlvlgldigigsvgvgilnkvtgeiihknsrifpaaqaennlvrrtnrqgrrlarrk
khrrvrlnrlfeesglitdftkisinlnpyqlrvkgltdelsneelfialknmvkhrgis
yktpgqiqleryqtygqlrgdftvekdgkkhrlinvfptsayrsealrilqtqqefnpqi
tdefinryleiltgkrkyyhgpgneksrtdygryrtsgetldnifgiligkctfypdefr
aakasytaqefnllndlnnltvptetkklskeqknqiinyvknekamgpaklfkyiakll
dvadikgyridksgkaeihtfeayrkmktletldieqmdretldklayvltlnteregiq
ealehefadgsfsqkqvdelvqfrkanssifgkgwhnfsvklmmelipelyetseeqmti
ltrlgyidekllteeiynpvvaksvrqaikivnaaikeygdfdniviemaretneddekk
aiqkiqkankdekdaamlkaanqyngkaelphsvfhghkqlatkirlwhqqgerclytgk
tisihdlinnsnqfevdailplsitfddslankvlvyatanqekgqrtpyqaldsmddaw
sfrelkafvresktlsnkkkeyllteediskfdviernlvdtryasrvvlnalqehfrah
kidtkvsvvrgqftsqlrrhwgiektrdtyhhhavdaliiaassqlnlyqhfvdtlkske
fedsilfsyqvdskfnrkisdatiyatrqakvgkdkadetyvlgkikdiytqdgydafmk
iykkdkskflmyrhdpqtfekviepilenypnkvpcnpflkykeehgyirkyskkgngpe
ikslkyydsklgnhiditpkdsnnkvvlqsvspwradvyfnkttgkyeilglkyadlqfe
kgtgtykisqekyndikkkegvdsdsefkftlykndlllvkdtetkeqqlfrflsrtmpk
qkhyvelkpydkqkfeggealikvlgnvansgqckkglgksnisiykvrtdvlgnqhiik
negdkpkldf

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.