PDB entry 6lyf

View 6lyf on RCSB PDB site
Description: crystal structure of the mouse endonuclease endog(h138a/se-met)
Deposited on 2020-02-14, released 2020-08-12
The last revision was dated 2020-08-12, with a file datestamp of 2020-08-07.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Endonuclease G, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: Endog
    Database cross-references and differences (RAF-indexed):
    • Uniprot O08600
      • engineered mutation (93)
  • Chain 'B':
    Compound: Endonuclease G, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: Endog
    Database cross-references and differences (RAF-indexed):
    • Uniprot O08600
      • engineered mutation (93)
  • Chain 'C':
    Compound: Endonuclease G, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: Endog
    Database cross-references and differences (RAF-indexed):
    • Uniprot O08600
      • engineered mutation (93)
  • Chain 'D':
    Compound: Endonuclease G, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: Endog
    Database cross-references and differences (RAF-indexed):
    • Uniprot O08600
      • engineered mutation (93)
  • Heterogens: MG, MSE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6lyfA (A:)
adlpalpggpaggtgelakyglpgvaqlrsresyvlsydprtrgalwvleqlrperlrgd
gdrsacdfreddsvhayhratnadyrgsgfdrgalaaaanhrwsqramddtfylsnvapq
vphlnqnawnnlerysrsltrtyqnvyvctgplflprteadgksyvkyqvigknhvavpt
hffkvlileaaggqielrsyvmpnapvdetiplerflvpiesierasgllfvpnilarag
nlkaitags

    Sequence, based on observed residues (ATOM records):
    >6lyfA (A:)
elakyglpgvaqlrsresyvlsydprtrgalwvleqlrperlrgdgdrsacdfreddsvh
ayhratnadyrgsgfdrgalaaaanhrwsqramddtfylsnvapqvphlnqnawnnlery
srsltrtyqnvyvctgplflprteadgksyvkyqvigknhvavpthffkvlileaaggqi
elrsyvmpnapvdetiplerflvpiesierasgllfvp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6lyfB (B:)
adlpalpggpaggtgelakyglpgvaqlrsresyvlsydprtrgalwvleqlrperlrgd
gdrsacdfreddsvhayhratnadyrgsgfdrgalaaaanhrwsqramddtfylsnvapq
vphlnqnawnnlerysrsltrtyqnvyvctgplflprteadgksyvkyqvigknhvavpt
hffkvlileaaggqielrsyvmpnapvdetiplerflvpiesierasgllfvpnilarag
nlkaitags

    Sequence, based on observed residues (ATOM records):
    >6lyfB (B:)
elakyglpgvaqlrsresyvlsydprtrgalwvleqlrperlrgdgdrsacdfreddsvh
ayhratnadyrgsgfdrgalaaaanhrwsqramddtfylsnvapqvphlnqnawnnlery
srsltrtyqnvyvctgplflprteadgksyvkyqvigknhvavpthffkvlileaaggqi
elrsyvmpnapvdetiplerflvpiesierasgllfvpn

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6lyfC (C:)
adlpalpggpaggtgelakyglpgvaqlrsresyvlsydprtrgalwvleqlrperlrgd
gdrsacdfreddsvhayhratnadyrgsgfdrgalaaaanhrwsqramddtfylsnvapq
vphlnqnawnnlerysrsltrtyqnvyvctgplflprteadgksyvkyqvigknhvavpt
hffkvlileaaggqielrsyvmpnapvdetiplerflvpiesierasgllfvpnilarag
nlkaitags

    Sequence, based on observed residues (ATOM records):
    >6lyfC (C:)
akyglpgvaqlrsresyvlsydprtrgalwvleqlrperlrgdgdrsacdfreddsvhay
hratnadyrgsgfdrgalaaaanhrwsqramddtfylsnvapqvphlnqnawnnlerysr
sltrtyqnvyvctgplflprteadgksyvkyqvigknhvavpthffkvlileaaggqiel
rsyvmpnapvdetiplerflvpiesierasgllfvpnil

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6lyfD (D:)
adlpalpggpaggtgelakyglpgvaqlrsresyvlsydprtrgalwvleqlrperlrgd
gdrsacdfreddsvhayhratnadyrgsgfdrgalaaaanhrwsqramddtfylsnvapq
vphlnqnawnnlerysrsltrtyqnvyvctgplflprteadgksyvkyqvigknhvavpt
hffkvlileaaggqielrsyvmpnapvdetiplerflvpiesierasgllfvpnilarag
nlkaitags

    Sequence, based on observed residues (ATOM records):
    >6lyfD (D:)
gelakyglpgvaqlrsresyvlsydprtrgalwvleqlrperlrgdgdrsacdfreddsv
hayhratnadyrgsgfdrgalaaaanhrwsqramddtfylsnvapqvphlnqnawnnler
ysrsltrtyqnvyvctgplflprteadgksyvkyqvigknhvavpthffkvlileaaggq
ielrsyvmpnapvdetiplerflvpiesierasgllfvpnila