PDB entry 6ltr

View 6ltr on RCSB PDB site
Description: crystal structure of cas12i2 ternary complex with single mg2+ bound in catalytic pocket
Deposited on 2020-01-23, released 2020-10-28
The last revision was dated 2020-11-04, with a file datestamp of 2020-10-30.
Experiment type: XRAY
Resolution: 2.51 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cas12i2
    Species: unidentified [TaxId:32644]
    Database cross-references and differences (RAF-indexed):
    • PDB 6LTR (0-End)
  • Chain 'B':
    Compound: RNA (56-mer)
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'C':
    Compound: DNA (35-mer)
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'D':
    Compound: DNA (5'-d(*gp*cp*cp*gp*cp*tp*tp*tp*cp*tp*tp*t)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'E':
    Compound: trans ssDNA
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: MG, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ltrA (A:)
smssaiksyksvlrpnerknqllkstiqcledgsafffkmlqglfggitpeivrfsteqe
kqqqdialwcavnwfrpvsqdslthtiasdnlvekfeeyyggtasdaikqyfsasigesy
ywndcrqqyydlcrelgvevsdlthdleilcrekclavatesnqnnsiisvlfgtgeked
rsvklritkkileaisnlkeipknvapiqeiilnvakatketfrqvyagnlgapstlekf
iakdgqkefdlkklqtdlkkvirgkskerdwccqeelrsyveqntiqydlwawgemfnka
htalkikstrnynfakqrleqfkeiqslnnllvvkklndffdseffsgeetyticvhhlg
gkdlsklykaweddpadpenaivvlcddlknnfkkepirnilryiftirqecsaqdilaa
akynqqldryksqkanpsvlgnqgftwtnavilpekaqrndrpnsldlriwlylklrhpd
grwkkhhipfydtrffqeiyaagnspvdtcqfrtprfgyhlpkltdqtairvnkkhvkaa
ktearirlaiqqgtlpvsnlkiteisatinskgqvripvkfdvgrqkgtlqigdrfcgyd
qnqtashayslwevvkegqyhkelgcfvrfissgdivsitenrgnqfdqlsyeglaypqy
adwrkkaskfvslwqitkknkkkeivtveakekfdaickyqprlykfnkeyayllrdivr
gkslvelqqirqeifrfieqdcgvtrlgslslstletvkavkgiiysyfstalnasknnp
isdeqrkefdpelfalleklelirtrkkkqkveriansliqtclennikfirgagdlstt
nnatkkkansrsmdwlargvfnkirqlapmhnitlfgcgslytshqdplvhrnpdkamkc
rwaaipvkdigdwvlrklsqnlraknigtgeyyhqgvkeflshyelqdleeellkwrsdr
ksnipcwvlqnrlaeklgnkeavvyipvrggriyfathkvatgavsivfdqkqvwvcnad
hvaaanialtvkgigeqssdeenpdgsriklqlts

    Sequence, based on observed residues (ATOM records):
    >6ltrA (A:)
smssaiksyksvlrpnerknqllkstiqcledgsafffkmlqglfggitpeivrfsteqe
kqqqdialwcavnwfrpvsqdslthtiasdnlvekfeeyyggtasdaikqyfsasigesy
ywndcrqqyydlcrelgvevsdlthdleilcrekclavatesnqnnsiisvlfgtgeked
rsvklritkkileaisnlkeipknvapiqeiilnvakatketfrqvyagnlgapstlekf
iakdgqkefdlkklqtdlkkvirgkskerdwccqeelrsyveqntiqydlwawgemfnka
htalkikstrnynfakqrleqfkeiqslnnllvvkklndffdseffsgeetyticvhhlg
gkdlsklykaweddpadpenaivvlcddlknnfkkepirnilryiftirqecsaqdilaa
akynqqldryksqkanpsvlgnqgftwtnavilpekaqrndrpnsldlriwlylklrhpd
grwkkhhipfydtrffqeiyaagnspvdtcqfrtprfgyhlpkltdqtairvnkkhvkaa
ktearirlaiqqgtlpvsnlkiteisatinskgqvripvkfdvgrqkgtlqigdrfcgyd
qnqtashayslwevvkegqyhkelgcfvrfissgdivsitenrgnqfdqlsyeglaypqy
adwrkkaskfvslwqitkknkkkeivtveakekfdaickyqprlykfnkeyayllrdivr
gkslvelqqirqeifrfieqdcgvtrlgslslstletvkavkgiiysyfstalnasknnp
isdeqrkefdpelfalleklelirtrkkkqkveriansliqtclennikfirgagdlstt
nnatkkkansrsmdwlargvfnkirqlapmhnitlfgcgslytshqdplvhrnpdkamkc
rwaaipvkdigdwvlrklsqnlraknigtgeyyhqgvkeflshyelqdleeellkwrsdr
ksnipcwvlqnrlaeklgnkeavvyipvrggriyfathkvatgavsivfdqkqvwvcnad
hvaaanialtvkgigeq

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.