PDB entry 6li2

View 6li2 on RCSB PDB site
Description: crystal structure of gpr52 ligand free form with rubredoxin fusion
Deposited on 2019-12-10, released 2020-02-26
The last revision was dated 2020-03-18, with a file datestamp of 2020-03-13.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Chimera of G-protein coupled receptor 52 and Rubredoxin
    Species: Homo sapiens [TaxId:9606]
    Gene: GPR52
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y2T5 (Start-219)
      • conflict (114)
      • linker (220)
    • Uniprot P00268 (221-273)
      • linker (274-275)
    • Uniprot Q9Y2T5 (276-351)
      • engineered mutation (289)
      • engineered mutation (325)
      • engineered mutation (329)
      • engineered mutation (332)
      • engineered mutation (334)
      • expression tag (352-356)
  • Heterogens: ZN, OLC, PEG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6li2A (A:)
ggivnvserhscplgfghysvvdvcifetvvivlltfliiagnltvifvfhcapllhhyt
tsyfiqtmayadlfvgvsclvptlsllhystgvhesltcqvfgyiisvlksvsmwclaci
svdrylaitkplsynqlvtpcrlriciiliwiyscliflpsffgwgkpgyhgdifewcat
swltsayftgfivcllyapaafvvcftyfhifkicrqhtkmkkytctvcgyiynpedgdp
dngvnpgtdfkdipddwvcplcgvgkdqfeeveeylmvlfritsvfymlqlpyiiyflle
ssrvldnptlsflttwlaisnsfcnpviyalsdstfrlglrrlsetmctscmeflevlfq
gphhhhhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6li2A (A:)
erhscplgfghysvvdvcifetvvivlltfliiagnltvifvfhclhhyttsyfiqtmay
adlfvgvsclvptlsllhystgvhesltcqvfgyiisvlksvsmwclacisvdrylaitk
plsynqlvtpcrlriciiliwiyscliflpsffgwgkpgyhgdifewcatswltsayftg
fivcllyapaafvvcftyfhifkicrqhtkmkkytctvcgyiynpedgdpdngvnpgtdf
kdipddwvcplcgvgkdqfeeveeylmvlfritsvfymlqlpyiiyfllessrvldnptl
sflttwlaisnsfcnpviyalsdstfrlglrrlsetmctscmeflev