PDB entry 6lgw

View 6lgw on RCSB PDB site
Description: Structure of Rabies virus glycoprotein in complex with neutralizing antibody 523-11 at acidic pH
Class: viral protein
Keywords: functional class, VIRAL PROTEIN
Deposited on 2019-12-06, released 2020-02-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-04-01, with a file datestamp of 2020-03-27.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: scFv 523-11 VH
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6LGW (0-End)
    Domains in SCOPe 2.08: d6lgwa_
  • Chain 'B':
    Compound: scFv 523-11 VL
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6LGW
    Domains in SCOPe 2.08: d6lgwb_
  • Chain 'C':
    Compound: scFv 523-11 VH
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6LGW (0-118)
    Domains in SCOPe 2.08: d6lgwc_
  • Chain 'D':
    Compound: scFv 523-11 VL
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6LGW
    Domains in SCOPe 2.08: d6lgwd_
  • Chain 'E':
    Compound: Glycoprotein,Glycoprotein,Glycoprotein
    Species: Rabies lyssavirus [TaxId:11292]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Glycoprotein,Glycoprotein,Glycoprotein
    Species: Rabies lyssavirus [TaxId:11292]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6lgwA (A:)
evqlqqfgaelvkpgasvkisckasgytftdynmdwvkqshgkslqwigdispyygstgy
sqkfkgkatltvdrssstaymelrsltsedtavyycarrnydgswfaywgqgtlvtvss

    Sequence, based on observed residues (ATOM records): (download) 
    >6lgwA (A:)
evqlqqfgaelvkpgasvkisckasgytftdynmdwvkqshgkslqwigdispyygstgy
sqkfkgkatltvdrssstaymelrsltsedtavyycarrnydgswfaywgqgtlvtvs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6lgwB (B:)
melvmtqspailsvspgervsfscrasqiigtsihwyqqrtngsprllikyasesisgip
srfsgsgsgtdftltinsvesddiadyycqqsnswpvtfgagtklelkr

    Sequence, based on observed residues (ATOM records): (download) 
    >6lgwB (B:)
elvmtqspailsvspgervsfscrasqiigtsihwyqqrtngsprllikyasesisgips
rfsgsgsgtdftltinsvesddiadyycqqsnswpvtfgagtkl

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6lgwC (C:)
evqlqqfgaelvkpgasvkisckasgytftdynmdwvkqshgkslqwigdispyygstgy
sqkfkgkatltvdrssstaymelrsltsedtavyycarrnydgswfaywgqgtlvtvss

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6lgwD (D:)
melvmtqspailsvspgervsfscrasqiigtsihwyqqrtngsprllikyasesisgip
srfsgsgsgtdftltinsvesddiadyycqqsnswpvtfgagtklelkr

    Sequence, based on observed residues (ATOM records): (download) 
    >6lgwD (D:)
elvmtqspailsvspgervsfscrasqiigtsihwyqqrtngsprllikyasesisgips
rfsgsgsgtdftltinsvesddiadyycqqsnswpvtfgagtkl

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.