PDB entry 6lgc

View 6lgc on RCSB PDB site
Description: bombyx mori gh13 sucrose hydrolase complexed with 1-deoxynojirimycin
Deposited on 2019-12-05, released 2020-05-20
The last revision was dated 2020-07-08, with a file datestamp of 2020-07-03.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Sucrose hydrolase
    Species: Bombyx mori [TaxId:7091]
    Gene: BmSuh
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Sucrose hydrolase
    Species: Bombyx mori [TaxId:7091]
    Gene: BmSuh
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA, MG, NOJ, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6lgcA (A:)
mgsshhhhhhssglvprgshmsnqnaptpppteviqldwwkncvlyqiyprsfkdsdgdg
igdlkgiiselkhfvdagvdaiwmspifespmvdfgydisnfydihyeygtmedfeelld
kahelglkvlldfvpnhasneseyfiksearepgyenffiwadplpnpenpgvrlppsnw
vsqfggsawewsekrqqyylhqfaiqqvdfdfrnpavkqemfnimkfwldkgadgfrlda
lpylieadpadhegrypddplsgltqfeshqlgytiplytkdlielydvvyewrefldey
nknhggdtrvvfsegyanvsmtmlyygnedgaigahfpfnfdfitdlssksnardfvyii
lrwltympyggipnwvfgnhdnnrmptrfrhdmvdglniinmllpgvavtyqgeeigmrd
gyvswedtvdieacnrgdpdtyhlysrdpartpyhwdnstsagfststntwlpvaedyqe
inlakqketarshfknyqaltklrkqatlshgeydiralsdrtfylvrslpthdtyvllf
nvserrdtvdlgrvphltlpatvyvssihsarlagheitssqlsleagealvlkaqpi

    Sequence, based on observed residues (ATOM records):
    >6lgcA (A:)
pppteviqldwwkncvlyqiyprsfkdsdgdgigdlkgiiselkhfvdagvdaiwmspif
espmvdfgydisnfydihyeygtmedfeelldkahelglkvlldfvpnhasneseyfiks
earepgyenffiwadplpnpenpgvrlppsnwvsqfggsawewsekrqqyylhqfaiqqv
dfdfrnpavkqemfnimkfwldkgadgfrldalpylieadpadhegrypddplsgltqfe
shqlgytiplytkdlielydvvyewrefldeynknhggdtrvvfsegyanvsmtmlyygn
edgaigahfpfnfdfitdlssksnardfvyiilrwltympyggipnwvfgnhdnnrmptr
frhdmvdglniinmllpgvavtyqgeeigmrdgyvswedtvdieacnrgdpdtyhlysrd
partpyhwdnstsagfststntwlpvaedyqeinlakqketarshfknyqaltklrkqat
lshgeydiralsdrtfylvrslpthdtyvllfnvserrdtvdlgrvphltlpatvyvssi
hsarlagheitssqlsleagealvlkaqpi

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6lgcB (B:)
mgsshhhhhhssglvprgshmsnqnaptpppteviqldwwkncvlyqiyprsfkdsdgdg
igdlkgiiselkhfvdagvdaiwmspifespmvdfgydisnfydihyeygtmedfeelld
kahelglkvlldfvpnhasneseyfiksearepgyenffiwadplpnpenpgvrlppsnw
vsqfggsawewsekrqqyylhqfaiqqvdfdfrnpavkqemfnimkfwldkgadgfrlda
lpylieadpadhegrypddplsgltqfeshqlgytiplytkdlielydvvyewrefldey
nknhggdtrvvfsegyanvsmtmlyygnedgaigahfpfnfdfitdlssksnardfvyii
lrwltympyggipnwvfgnhdnnrmptrfrhdmvdglniinmllpgvavtyqgeeigmrd
gyvswedtvdieacnrgdpdtyhlysrdpartpyhwdnstsagfststntwlpvaedyqe
inlakqketarshfknyqaltklrkqatlshgeydiralsdrtfylvrslpthdtyvllf
nvserrdtvdlgrvphltlpatvyvssihsarlagheitssqlsleagealvlkaqpi

    Sequence, based on observed residues (ATOM records):
    >6lgcB (B:)
pppteviqldwwkncvlyqiyprsfkdsdgdgigdlkgiiselkhfvdagvdaiwmspif
espmvdfgydisnfydihyeygtmedfeelldkahelglkvlldfvpnhasneseyfiks
earepgyenffiwadplpnpenpgvrlppsnwvsqfggsawewsekrqqyylhqfaiqqv
dfdfrnpavkqemfnimkfwldkgadgfrldalpylieadpadhegrypddplsgltqfe
shqlgytiplytkdlielydvvyewrefldeynknhggdtrvvfsegyanvsmtmlyygn
edgaigahfpfnfdfitdlssksnardfvyiilrwltympyggipnwvfgnhdnnrmptr
frhdmvdglniinmllpgvavtyqgeeigmrdgyvswedtvdieacnrgdpdtyhlysrd
partpyhwdnstsagfststntwlpvaedyqeinlakqketarshfknyqaltklrkqat
lshgeydiralsdrtfylvrslpthdtyvllfnvserrdtvdlgrvphltlpatvyvssi
hsarlagheitssqlsleagealvlkaqpi