PDB entry 6lb3

View 6lb3 on RCSB PDB site
Description: crystal structure of pa4674 in complex with its operator dna (18bp) from pseudomonas aeruginosa
Deposited on 2019-11-13, released 2020-11-18
The last revision was dated 2020-11-18, with a file datestamp of 2020-11-13.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: DNA (5'-d(p*ap*cp*gp*cp*tp*tp*ap*ap*cp*gp*tp*tp*ap*ap*gp*gp*gp*t)-3')
    Species: PSEUDOMONAS AERUGINOSA, synthetic [TaxId:287]
  • Chain 'J':
    Compound: DNA (5'-d(p*ap*cp*cp*cp*tp*tp*ap*ap*cp*gp*tp*tp*ap*ap*gp*cp*gp*t)-3')
    Species: PSEUDOMONAS AERUGINOSA, synthetic [TaxId:287]
  • Chain 'K':
    Compound: DNA (5'-d(p*ap*cp*gp*cp*tp*tp*ap*ap*cp*gp*tp*tp*ap*ap*gp*gp*gp*t)-3')
    Species: PSEUDOMONAS AERUGINOSA, synthetic [TaxId:287]
  • Chain 'L':
    Compound: DNA (5'-d(p*ap*cp*cp*cp*tp*tp*ap*ap*cp*gp*tp*tp*ap*ap*gp*cp*gp*t)-3')
    Species: PSEUDOMONAS AERUGINOSA, synthetic [TaxId:287]
  • Chain 'M':
    Compound: DNA (5'-d(p*ap*cp*gp*cp*tp*tp*ap*ap*cp*gp*tp*tp*ap*ap*gp*gp*gp*t)-3')
    Species: PSEUDOMONAS AERUGINOSA, synthetic [TaxId:287]
  • Chain 'N':
    Compound: DNA (5'-d(p*ap*cp*cp*cp*tp*tp*ap*ap*cp*gp*tp*tp*ap*ap*gp*cp*gp*t)-3')
    Species: PSEUDOMONAS AERUGINOSA, synthetic [TaxId:287]
  • Heterogens: SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6lb3A (A:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6lb3A (A:)
rpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfdts
aqfwmnlqseyslatayaangkqieheiepl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6lb3B (B:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6lb3B (B:)
gmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfd
tsaqfwmnlqseyslatayaangkqieheiepl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6lb3C (C:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6lb3C (C:)
gmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfd
tsaqfwmnlqseyslatayaangkqieheiepl

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6lb3D (D:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6lb3D (D:)
mrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfdt
saqfwmnlqseyslatayaangkqieheiepl

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6lb3E (E:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6lb3E (E:)
mrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfdt
saqfwmnlqseyslatayaangkqieheie

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6lb3F (F:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6lb3F (F:)
mrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfdt
saqfwmnlqseyslatayaangkqieheiepll

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6lb3G (G:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6lb3G (G:)
pihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfdtsa
qfwmnlqseyslatayaangkqieheie

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6lb3H (H:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6lb3H (H:)
gmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfd
tsaqfwmnlqseyslatayaangkqieheieplla

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    No sequence available.

  • Chain 'M':
    No sequence available.

  • Chain 'N':
    No sequence available.