PDB entry 6lb2

View 6lb2 on RCSB PDB site
Description: Crystal structure of rhesus macaque MHC class I molecule Mamu-B*098 complexed with mono-acyl glycerol
Class: immune system
Keywords: MHC class I protein, complex, mono-acyl glycerol, IMMUNE SYSTEM
Deposited on 2019-11-13, released 2020-04-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-05-27, with a file datestamp of 2020-05-22.
Experiment type: XRAY
Resolution: 1.69 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MHC class I antigen
    Species: Macaca mulatta [TaxId:9544]
    Gene: Mamu-B
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1E1GJG5 (0-276)
      • engineered mutation (167)
    Domains in SCOPe 2.08: d6lb2a1, d6lb2a2
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Macaca mulatta [TaxId:9544]
    Gene: B2M
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6lb2b_
  • Chain 'C':
    Compound: MHC class I antigen
    Species: Macaca mulatta [TaxId:9544]
    Gene: Mamu-B
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1E1GJG5 (0-276)
      • engineered mutation (167)
    Domains in SCOPe 2.08: d6lb2c1, d6lb2c2
  • Chain 'D':
    Compound: Beta-2-microglobulin
    Species: Macaca mulatta [TaxId:9544]
    Gene: B2M
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6lb2d_
  • Heterogens: EKG, ZN, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6lb2A (A:)
agshsmryfsttvsrpgrgeprfivvgyvddtqfvrfdsdaaspkmeprapwmeqegpey
weeqtrrvkdaaqtfrvslgnlrgyynqseagshtlqtmsgcdlgpdgrllrgyyqqayd
grdyialnedlrswtaadeaaqntqrkweaagvaeqwraylegecleslrrylengketl
qraeppkthvthhpvsdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpggdg
tfqkwgavvvpsgeeqrytchvqheglpepltlrwep

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6lb2B (B:)
aiqrtpkiqvysrhppengkpnflncyvsgfhpsdievdllkngekmgkvehsdlsfskd
wsfyllyyteftpnekdeyacrvnhvtlsgprtvkwdrdm

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6lb2C (C:)
agshsmryfsttvsrpgrgeprfivvgyvddtqfvrfdsdaaspkmeprapwmeqegpey
weeqtrrvkdaaqtfrvslgnlrgyynqseagshtlqtmsgcdlgpdgrllrgyyqqayd
grdyialnedlrswtaadeaaqntqrkweaagvaeqwraylegecleslrrylengketl
qraeppkthvthhpvsdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpggdg
tfqkwgavvvpsgeeqrytchvqheglpepltlrwep

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6lb2D (D:)
aiqrtpkiqvysrhppengkpnflncyvsgfhpsdievdllkngekmgkvehsdlsfskd
wsfyllyyteftpnekdeyacrvnhvtlsgprtvkwdrdm