PDB entry 6lb1
View 6lb1 on RCSB PDB site
Description: Cryo-EM structure of echovirus 11 A-particle at pH 5.5
Class: virus
Keywords: Cryo-EM structure, echovirus 11, A-particle, pH 5.5, VIRUS
Deposited on
2019-11-13, released
2020-10-07
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-10-07, with a file datestamp of
2020-10-02.
Experiment type: EM
Resolution: 2.58 Å
R-factor: N/A
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Capsid protein VP1
Species: Echovirus E11 [TaxId:12078]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6lb1a_ - Chain 'B':
Compound: capsid protein VP2
Species: Echovirus E11 [TaxId:12078]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: capsid protein vp3
Species: Echovirus E11 [TaxId:12078]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6lb1c_
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6lb1A (A:)
sessienflcrsacvymgeyhttntdtsklfaswtinarrmvqmrrklelftyvrfdmev
tfvitskqdqgtqlgqdmpplthqimyippggpipksvtdytwqtstnpsifwtegnapp
rmsipfisignaysnfydgwshfsqngvygyntlnhmgqiyvrhvngssplpmtstvrmy
fkpkhvkvwvprpprlcqyknastvnftptnitekrqsinyipetv
Sequence, based on observed residues (ATOM records): (download)
>6lb1A (A:)
sessienflcrsacvymgeyhttntdtsklfaswtinarrmvqmrrklelftyvrfdmev
tfvitskqdqgtqlgqdmpplthqimyippggpipksvtdytwqtstnpsifwtegnapp
rmsipfisignaysnfydgwshgvygyntlnhmgqiyvrhvngssplpmtstvrmyfkpk
hvkvwvprpprlcqyknastvnftptnitekrqsinyipetv
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>6lb1C (C:)
glpvmntpgsnqfltsddfqspsampqfdvtpelnipgevqnlmeiaevdsvvpvnnveg
kldtmeiyripvqsgnhqssqvfgfqvqpgldnvfkhtllgeilnyyahwsgsikltfvf
cgsamatgkfllayappganapksrkdamlgthiiwdvglqsscvlcipwisqthyrlvq
qdeytsagnvtcwyqtgivvpagtptscsimcfvsacndfsvrllkdtpfi
Sequence, based on observed residues (ATOM records): (download)
>6lb1C (C:)
glpvmntpgsnqfltsddfqspsampqfdvtpelnipgevqnlmeiaevdsvvpvnnveg
kldtmeiyripvqsgnhqssqvfgfqvqpgldnvfkhtllgeilnyyahwsgsikltfvf
cgsamatgkfllayappganapksrkdamlgthiiwdvglqsscvlcipwisqtytsagn
vtcwyqtgivvpagtptscsimcfvsacndfsvrllkdtpfi