PDB entry 6lad

View 6lad on RCSB PDB site
Description: crystal structure of amuc_1100 from akkermansia muciniphila
Deposited on 2019-11-12, released 2020-08-05
The last revision was dated 2021-03-03, with a file datestamp of 2021-02-26.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Amuc_1100
    Species: Akkermansia muciniphila (strain ATCC BAA-835 / Muc) [TaxId:349741]
    Gene: Amuc_1100
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Amuc_1100
    Species: Akkermansia muciniphila (strain ATCC BAA-835 / Muc) [TaxId:349741]
    Gene: Amuc_1100
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Amuc_1100
    Species: Akkermansia muciniphila (strain ATCC BAA-835 / Muc) [TaxId:349741]
    Gene: Amuc_1100
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Amuc_1100
    Species: Akkermansia muciniphila (strain ATCC BAA-835 / Muc) [TaxId:349741]
    Gene: Amuc_1100
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Amuc_1100
    Species: Akkermansia muciniphila (strain ATCC BAA-835 / Muc) [TaxId:349741]
    Gene: Amuc_1100
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Amuc_1100
    Species: Akkermansia muciniphila (strain ATCC BAA-835 / Muc) [TaxId:349741]
    Gene: Amuc_1100
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ladA (A:)
mivnskrseldkkisiaakeiksanaaeitpsrssneelekelnryakavgsletaykpf
lassalvpttptafqnelktfrdslissckkknilitdtsswlgfqvystqapsvqaast
lgfelkainslvnklaecglskfikvyrpqlpietpannpeesdeadqapwtpmpleiaf
qgdresvlkamnaitgmqdylftvnsirirnermmpppianpaaakpaaaqpatgaaslt
padeaaapaapaiqqvikpymgkeqvfvqvslnlvhfnqpkaqepsedlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ladA (A:)
ssneelekelnryakavgsletaykpflassalvpttptafqnelktfrdslissckkkn
ilitdtsswlgfqvystqapsvqaastlgfelkainslvnklaecglskfikvyrpqlpi
etpanneadqapwtpmpleiafqgdresvlkamnaitgmqdylftvnsirirnerkeqvf
vqvslnlvhfnqpkaqe

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ladB (B:)
mivnskrseldkkisiaakeiksanaaeitpsrssneelekelnryakavgsletaykpf
lassalvpttptafqnelktfrdslissckkknilitdtsswlgfqvystqapsvqaast
lgfelkainslvnklaecglskfikvyrpqlpietpannpeesdeadqapwtpmpleiaf
qgdresvlkamnaitgmqdylftvnsirirnermmpppianpaaakpaaaqpatgaaslt
padeaaapaapaiqqvikpymgkeqvfvqvslnlvhfnqpkaqepsedlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ladB (B:)
sneelekelnryakavgsletaykpflassalvpttptafqnelktfrdslissckkkni
litdtsswlgfqvystqapsvqaastlgfelkainslvnklaecglskfikvyrpqlpie
tpqapwtpmpleiafqgdresvlkamnaitgmqdylftvnsirireqvfvqvslnlvhfn
qpka

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ladC (C:)
mivnskrseldkkisiaakeiksanaaeitpsrssneelekelnryakavgsletaykpf
lassalvpttptafqnelktfrdslissckkknilitdtsswlgfqvystqapsvqaast
lgfelkainslvnklaecglskfikvyrpqlpietpannpeesdeadqapwtpmpleiaf
qgdresvlkamnaitgmqdylftvnsirirnermmpppianpaaakpaaaqpatgaaslt
padeaaapaapaiqqvikpymgkeqvfvqvslnlvhfnqpkaqepsedlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ladC (C:)
ssneelekelnryakavgsletaykpflassalvpttptafqnelktfrdslissckkkn
ilitdtsswlgfqvystqapsvqaastlgfelkainslvnklaecglskfikvyrpqlpi
etpannqapwtpmpleiafqgdresvlkamnaitgmqdylftvnsirirnerkeqvfvqv
slnlvhfnqpkaqe

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ladD (D:)
mivnskrseldkkisiaakeiksanaaeitpsrssneelekelnryakavgsletaykpf
lassalvpttptafqnelktfrdslissckkknilitdtsswlgfqvystqapsvqaast
lgfelkainslvnklaecglskfikvyrpqlpietpannpeesdeadqapwtpmpleiaf
qgdresvlkamnaitgmqdylftvnsirirnermmpppianpaaakpaaaqpatgaaslt
padeaaapaapaiqqvikpymgkeqvfvqvslnlvhfnqpkaqepsedlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ladD (D:)
sneelekelnryakavgsletaykpflassalvpttptafqnelktfrdslissckkkni
litdtsswlgfqvystqapsvqaastlgfelkainslvnklaecglskfikvyrpqlpie
tpqapwtpmpleiafqgdresvlkamnaitgmqdylftvnsirirnermmpeqvfvqvsl
nlvhfnqpka

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6ladE (E:)
mivnskrseldkkisiaakeiksanaaeitpsrssneelekelnryakavgsletaykpf
lassalvpttptafqnelktfrdslissckkknilitdtsswlgfqvystqapsvqaast
lgfelkainslvnklaecglskfikvyrpqlpietpannpeesdeadqapwtpmpleiaf
qgdresvlkamnaitgmqdylftvnsirirnermmpppianpaaakpaaaqpatgaaslt
padeaaapaapaiqqvikpymgkeqvfvqvslnlvhfnqpkaqepsedlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ladE (E:)
ssneelekelnryakavgsletaykpflassalvpttptafqnelktfrdslissckkkn
ilitdtsswlgfqvystqapsvqaastlgfelkainslvnklaecglskfikvyrpqlpi
etpqapwtpmpleiafqgdresvlkamnaitgmqdylftvnsirirneqvfvqvslnlvh
fnqpka

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6ladF (F:)
mivnskrseldkkisiaakeiksanaaeitpsrssneelekelnryakavgsletaykpf
lassalvpttptafqnelktfrdslissckkknilitdtsswlgfqvystqapsvqaast
lgfelkainslvnklaecglskfikvyrpqlpietpannpeesdeadqapwtpmpleiaf
qgdresvlkamnaitgmqdylftvnsirirnermmpppianpaaakpaaaqpatgaaslt
padeaaapaapaiqqvikpymgkeqvfvqvslnlvhfnqpkaqepsedlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ladF (F:)
sneelekelnryakavgsletaykpflassalvpttptafqnelktfrdslissckkkni
litdtsswlgfqvystqapsvqaastlgfelkainslvnklaecglskfikvyrpqlpie
tpaapwtpmpleiafqgdresvlkamnaitgmqdylftvnsirireqvfvqvslnlvhfn
qp