PDB entry 6l97

View 6l97 on RCSB PDB site
Description: complex of dna polymerase iv and l-dna duplex
Deposited on 2019-11-08, released 2020-07-08
The last revision was dated 2020-07-08, with a file datestamp of 2020-07-03.
Experiment type: XRAY
Resolution: 2.36 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase IV
    Species: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) [TaxId:273057]
    Gene: DBH, DPO4, SSO2448
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA polymerase IV
    Species: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) [TaxId:273057]
    Gene: DBH, DPO4, SSO2448
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: DNA (5'-d(*(0dg)p*(0dg)p*(0dg)p*(0dg)p*(0dg)p*(0da)p*(0da)p*(0dg)p*(0dg)p*(0da)p*(0dt)p*(0dt)p*(0dc)p*(0dc))-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'T':
    Compound: DNA (5'-d(p*(0dg)p*(0dg)p*(0da)p*(0da)p*(0dt)p*(0dc)p*(0dc)p*(0dt)p*(0dt)p*(0dc)p*(0dc)p*(0dc)p*(0dc)p*(0dc))-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6l97A (A:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfieaigldkffdtlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6l97A (A:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgavatanyearkfgvkagipiveakk
ilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynlgl
eiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvpgi
gnitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrksig
rivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfphgi
sketaysesvkllqkileederkirrigvrfskfi

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6l97B (B:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsgrfedsgavatanyearkfgvkagip
iveakkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyre
aynlgleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldi
advpgignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtr
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfieaigldkffdtlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6l97B (B:)
mivlfvdfdyfyaqveevlnpslkgkpvvvcvfsdsgavatanyearkfgvkagipivea
kkilpnavylpmrkevyqqvssrimnllreysekieiasideayldisdkvrdyreaynl
gleiknkilekekitvtvgisknkvfakiaadmakpngikviddeevkrlireldiadvp
gignitaeklkklginklvdtlsiefdklkgmigeakakylislardeynepirtrvrks
igrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgrtfph
gisketaysesvkllqkileederkirrigvrfskfi

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.