PDB entry 6l6o

View 6l6o on RCSB PDB site
Description: Crystal structure of stabilized Rab5a GTPase domain from Leishmania donovani
Class: endocytosis
Keywords: Intracellular trafficking, GTPase, ENDOCYTOSIS
Deposited on 2019-10-29, released 2020-11-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-11-11, with a file datestamp of 2020-11-06.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Rab5a
    Species: Leishmania donovani [TaxId:5661]
    Gene: Rab5a
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A109NYM0 (Start-176)
      • engineered mutation (59-60)
      • engineered mutation (73)
      • engineered mutation (88)
    Domains in SCOPe 2.08: d6l6oa_
  • Heterogens: GDP, GOL, ACT, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6l6oA (A:)
gsmnthppqlmeatsakivmlgesgagkssialrftrneflanqettigaaflsktvmid
gralkyeiwdtaglerfrslapiyyrgasgalvvyditnseslkkaqtwikelranadps
liivlvgnkkdlgslrqvsfedgqrlaaeeqlaafyeasakdnnnveqvfldlaakl

    Sequence, based on observed residues (ATOM records): (download) 
    >6l6oA (A:)
atsakivmlgesgagkssialrftrneflanqettigaaflsktvmidgralkyeiwdta
glerfrslapiyyrgasgalvvyditnseslkkaqtwikelranadpsliivlvgnkkdl
gslrqvsfedgqrlaaeeqlaafyeasakdnnnveqvfldlaakl