PDB entry 6l4z

View 6l4z on RCSB PDB site
Description: Crystal structure of Zika NS2B-NS3 protease with compound 6
Class: viral protein
Keywords: Viral protease, Protease inhibitor complex, VIRAL PROTEIN
Deposited on 2019-10-21, released 2020-07-15
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-07-15, with a file datestamp of 2020-07-10.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Genome polyprotein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6l4za_
  • Chain 'B':
    Compound: Genome polyprotein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6l4zb_
  • Chain 'C':
    Compound: Genome polyprotein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6l4zc_
  • Chain 'D':
    Compound: Genome polyprotein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6l4zd_
  • Chain 'E':
    Compound: Genome polyprotein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6l4ze_
  • Chain 'F':
    Compound: Genome polyprotein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6l4zf_
  • Chain 'G':
    Compound: Genome polyprotein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6l4zg_
  • Chain 'H':
    Compound: Genome polyprotein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6l4zh_
  • Heterogens: E5X, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6l4zA (A:)
    dmyieragditwekdaevtgnsprldvaldesgdfslv
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6l4zB (B:)
    gettdgvyrvmtrrllgstqvgvgvmqegvfhtmwhvtkgaalrsgegrldpywgdvkqd
    lvsycgpwkldaawdglsevqllavppgerakniqtlpgifktkdgdigavaldypagts
    gspildkcgrviglygngvvikngsyvsaitqgkr
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6l4zC (C:)
    myieragditwekdaevtgnsprldvaldesgdfslv
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >6l4zD (D:)
    ttdgvyrvmtrrllgstqvgvgvmqegvfhtmwhvtkgaalrsgegrldpywgdvkqdlv
    sycgpwkldaawdglsevqllavppgerakniqtlpgifktkdgdigavaldypagtsgs
    pildkcgrviglygngvvikngsyvsaitqgkr
    

    Sequence, based on observed residues (ATOM records): (download)
    >6l4zD (D:)
    ttdgvyrvmtstqvgvgvmqegvfhtmwhvtkgaalrsgegrldpywgdvkqdlvsycgp
    wkldaawdglsevqllavppgerakniqtlpgifktkdgdigavaldypagtsgspildk
    cgrviglygngvvikngsyvsaitqgkr
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6l4zE (E:)
    dmyieragditwekdaevtgnsprldvaldesgdfslv
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6l4zF (F:)
    tdgvyrvmtrrllgstqvgvgvmqegvfhtmwhvtkgaalrsgegrldpywgdvkqdlvs
    ycgpwkldaawdglsevqllavppgerakniqtlpgifktkdgdigavaldypagtsgsp
    ildkcgrviglygngvvikngsyvsaitqgkr
    

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6l4zG (G:)
    dmyieragditwekdaevtgnsprldvaldesgdfslvee
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >6l4zH (H:)
    evkkgettdgvyrvmtrrllgstqvgvgvmqegvfhtmwhvtkgaalrsgegrldpywgd
    vkqdlvsycgpwkldaawdglsevqllavppgerakniqtlpgifktkdgdigavaldyp
    agtsgspildkcgrviglygngvvikngsyvsaitqgkr
    

    Sequence, based on observed residues (ATOM records): (download)
    >6l4zH (H:)
    evkkgettdgvyrvmttqvgvgvmqegvfhtmwhvtkgaalrsgegrldpywgdvkqdlv
    sycgpwkldaawdglsevqllavppgerakniqtlpgifktkdgdigavaldypagtsgs
    pildkcgrviglygngvvikngsyvsaitqgkr