PDB entry 6l3m

View 6l3m on RCSB PDB site
Description: crystal structure of the acyltransferase domain from the third module of the ansamitocin polyketide synthase
Deposited on 2019-10-11, released 2019-12-18
The last revision was dated 2020-05-20, with a file datestamp of 2020-05-15.
Experiment type: XRAY
Resolution: 1.77 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: polyketide synthase
    Species: Actinosynnema pretiosum subsp. auranticum [TaxId:42198]
    Gene: AsmAT3
    Database cross-references and differences (RAF-indexed):
    • PDB 6L3M (0-End)
  • Chain 'B':
    Compound: polyketide synthase
    Species: Actinosynnema pretiosum subsp. auranticum [TaxId:42198]
    Gene: AsmAT3
    Database cross-references and differences (RAF-indexed):
    • PDB 6L3M (0-419)
  • Chain 'C':
    Compound: polyketide synthase
    Species: Actinosynnema pretiosum subsp. auranticum [TaxId:42198]
    Gene: AsmAT3
    Database cross-references and differences (RAF-indexed):
    • PDB 6L3M (0-End)
  • Chain 'D':
    Compound: polyketide synthase
    Species: Actinosynnema pretiosum subsp. auranticum [TaxId:42198]
    Gene: AsmAT3
    Database cross-references and differences (RAF-indexed):
    • PDB 6L3M (0-419)
  • Heterogens: GOL, E5U, PO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6l3mA (A:)
vpvpvpvavsgattaglraqaarlaghlrerpalgpeavarplllsraqrerravvvaad
rdslltgldalaggeagprlasgaadvtgrvvlvfpgqgahwtgvaerlwreapvfadsm
arcadvlrdlagwelrevlvdpvalervdvlqpvsfavvvslaalwasvgvrpdavvghs
qgevaaahvagaltlaeaarivvlrsaliarelsgrgamltvvadvervtallagfegrv
cvaavngpasvtvsgedgavrefervlsarrmlrwrlpgvdfaghspqvdalraellaal
gdiasrepeipllstvtgepatrldaehwyrnlrepvrfadavtalldrghrvfvevsph
pvlttsvvdlaaphrtavvgtlrrdeggldrfllsaaelhvrgvpvdlarhagagtaevp

    Sequence, based on observed residues (ATOM records):
    >6l3mA (A:)
vpvpvpvavsgattaglraqaarlaghlrerpalgpeavarplllsraqrerravvvaad
rdslltgldalaggeagprlasgaadvtgrvvlvfpgqgahwtgvaerlwreapvfadsm
arcadvlrdlagwelrevlvdpvalervdvlqpvsfavvvslaalwasvgvrpdavvghs
qgevaaahvagaltlaeaarivvlrsaliarelsgrgamltvvadvervtallagfegrv
cvaavngpasvtvsgedgavrefervlsarrmlrwrlpgvdfaghspqvdalraellaal
gdiasrepeipllstvtgepatrldaehwyrnlrepvrfadavtalldrghrvfvevsph
pvlttsvvdlaaphrtavvgtlrrdeggldrfllsaaelhvrgvpvdlarhagagtaev

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6l3mB (B:)
vpvpvpvavsgattaglraqaarlaghlrerpalgpeavarplllsraqrerravvvaad
rdslltgldalaggeagprlasgaadvtgrvvlvfpgqgahwtgvaerlwreapvfadsm
arcadvlrdlagwelrevlvdpvalervdvlqpvsfavvvslaalwasvgvrpdavvghs
qgevaaahvagaltlaeaarivvlrsaliarelsgrgamltvvadvervtallagfegrv
cvaavngpasvtvsgedgavrefervlsarrmlrwrlpgvdfaghspqvdalraellaal
gdiasrepeipllstvtgepatrldaehwyrnlrepvrfadavtalldrghrvfvevsph
pvlttsvvdlaaphrtavvgtlrrdeggldrfllsaaelhvrgvpvdlarhagagtaevp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6l3mC (C:)
vpvpvpvavsgattaglraqaarlaghlrerpalgpeavarplllsraqrerravvvaad
rdslltgldalaggeagprlasgaadvtgrvvlvfpgqgahwtgvaerlwreapvfadsm
arcadvlrdlagwelrevlvdpvalervdvlqpvsfavvvslaalwasvgvrpdavvghs
qgevaaahvagaltlaeaarivvlrsaliarelsgrgamltvvadvervtallagfegrv
cvaavngpasvtvsgedgavrefervlsarrmlrwrlpgvdfaghspqvdalraellaal
gdiasrepeipllstvtgepatrldaehwyrnlrepvrfadavtalldrghrvfvevsph
pvlttsvvdlaaphrtavvgtlrrdeggldrfllsaaelhvrgvpvdlarhagagtaevp

    Sequence, based on observed residues (ATOM records):
    >6l3mC (C:)
vpvpvpvavsgattaglraqaarlaghlrerpalgpeavarplllsraqrerravvvaad
rdslltgldalaggeagprlasgaadvtgrvvlvfpgqgahwtgvaerlwreapvfadsm
arcadvlrdlagwelrevlvdpvalervdvlqpvsfavvvslaalwasvgvrpdavvghs
qgevaaahvagaltlaeaarivvlrsaliarelsgrgamltvvadvervtallagfegrv
cvaavngpasvtvsgedgavrefervlsarrmlrwrlpgvdfaghspqvdalraellaal
gdiasrepeipllstvtgepatrldaehwyrnlrepvrfadavtalldrghrvfvevsph
pvlttsvvdlaaphrtavvgtlrrdeggldrfllsaaelhvrgvpvdlarhagagtaev

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6l3mD (D:)
vpvpvpvavsgattaglraqaarlaghlrerpalgpeavarplllsraqrerravvvaad
rdslltgldalaggeagprlasgaadvtgrvvlvfpgqgahwtgvaerlwreapvfadsm
arcadvlrdlagwelrevlvdpvalervdvlqpvsfavvvslaalwasvgvrpdavvghs
qgevaaahvagaltlaeaarivvlrsaliarelsgrgamltvvadvervtallagfegrv
cvaavngpasvtvsgedgavrefervlsarrmlrwrlpgvdfaghspqvdalraellaal
gdiasrepeipllstvtgepatrldaehwyrnlrepvrfadavtalldrghrvfvevsph
pvlttsvvdlaaphrtavvgtlrrdeggldrfllsaaelhvrgvpvdlarhagagtaevp