PDB entry 6l35

View 6l35 on RCSB PDB site
Description: psi-lhci supercomplex from physcometrella patens
Deposited on 2019-10-09, released 2021-02-10
The last revision was dated 2021-03-03, with a file datestamp of 2021-02-26.
Experiment type: EM
Resolution: 3.23 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '2':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain '3':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain '5':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain '6':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'A':
    Compound: photosystem I p700 chlorophyll a apoprotein a1
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: photosystem I p700 chlorophyll a apoprotein a2
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: photosystem I iron-sulfur center
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Predicted protein PsaD
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: PsaE
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: psi-f
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Predicted protein PsaG
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: PsaH photosystem I reaction center subunit
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Photosystem I reaction center subunit VIII
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Photosystem I reaction center subunit IX
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: PsaK
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: PSI subunit V
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: Photosystem I reaction center subunit XII
    Species: Physcomitrium patens [TaxId:3218]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CLA, PQN, LHG, BCR, SF4, DGD, LMG, CHL, LUT, XAT

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain '2':
    Sequence, based on SEQRES records:
    >6l352 (2:)
    alpnndrplwfpgskapewldgslpgdfgfdplglgsdpellkwfvqaelvhcrwamlga
    agifipealtkagilntpswnvagdqqyfadpttlfvielilfawaegrrwadivnpgcv
    nvdpvfpnnkltgtdvgypgglwfdplgwgqtkdakklkelrtkeikngrlamlavlgav
    vqanythtgpidnllahladpghntifals
    

    Sequence, based on observed residues (ATOM records):
    >6l352 (2:)
    ndrplwfpgskapewldgslpgdfgfdplglgsdpellkwfvqaelvhcrwamlgaagif
    ipealtkagilntpswnvagdqqyfadpttlfvielilfawaegrrwadivnpgcvnvdp
    vfpnnkltgtdvgypgglwfdplgwgqtkdakklkelrtkeikngrlamlavlgavvqan
    ythtgpidnllahladpghntifals
    

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records:
    >6l353 (3:)
    faskqslsyldgtlpgdygfdplglmdpegaggfidpqwlpyaeiingrfamlgaagaia
    pevlgriglipqetaipwfqsgvippvgnysywadpytlfvlemalmgfaehrraqdyyk
    pgsmgkqyflglekflggsgnpaypggpifnflgfgknekelqelkvkevkngrlammav
    lgyftqaiftgvgpfqnlldhladpvhnnvltn
    

  • Chain '5':
    Sequence, based on SEQRES records:
    >6l355 (5:)
    gaerplwlpgttppahldgtlagdfgfdplglgqdpqdlrwyvqaelvhsrfamagvagi
    lftdllrasgrtdipvwfeagatkfdfadtttlfvvqlilmgfvetkrwmdivkpgsqaa
    edsffgfeaafegletgypggplfnplgfandptkpqplrwkeikngrlamvamvgfmvq
    ayvtktgpienllthlsdpvhntii
    

    Sequence, based on observed residues (ATOM records):
    >6l355 (5:)
    rplwlpgttppahldgtlagdfgfdplglgqdpqdlrwyvqaelvhsrfamagvagilft
    dllrasgrtdipvwfeagatkfdfadtttlfvvqlilmgfvetkrwmdivkpgsqaaeds
    ffgfeaafegletgypggplfnplgfandptkpqplrwkeikngrlamvamvgfmvqayv
    tktgpienllthlsdpvhntii
    

  • Chain '6':
    Sequence; same for both SEQRES and ATOM records:
    >6l356 (6:)
    ewlpgnprpsyldgsapgdfgfdplglgevpenlerfkeseliharwamlavpgvlipea
    lgygnwvsaqkwaatpggqatylgnpvpwgnlpvilaieflaiafaesqrngepdpekrk
    ypggafdplgfskganleelklkeikngrlalvaflgfavqaiaypgtgplenlkthlad
    pwhntiahviip
    

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6l35A (A:)
    evkimvekdpvktsfekwakpghfsrtlakgpntttwiwnlhadahdfdshtndleeisr
    kvfsahfgqlavifiwlsgmyfhgarfsnyeawlsdpthikpsaqvvwpivgqkilngdv
    gggfqgiqitsgffqlwrasgitselqlyttaigglifaalmlfagwfhyhkaapklawf
    qnvesmlnhhlagllglgslawaghqvhvslpinrlldagvdpkeiplphefilnrdlla
    qlypsfskgltpfftlnwseysdfltfrgglnpvtgglwltdtahhhlaiavlflvaghm
    yrtnfgighsmkeileahkgpftgeghkglyeilttswhaqlainlamlgsltiivahhm
    yamppypylatdyatqlslfthhmwiggflvvgaaahaaifmvrdydpttqynnlldrvl
    rhrdaiishlnwvciflgfhsfglyihndtmsalgrpqdmfsdtaiqlqpvfaqwiqnth
    alapsltapnatastsltwgggdlvavggkvallpiplgtadflvhhihaftihvtvlil
    lkgvlfarssrlipdkanlgfrfpcdgpgrggtcqvsawdhvflglfwmynaisvvifhf
    swkmqsdvwgsisdqgvvthitggnfaqssitingwlrdflwaqasqviqsygsslsayg
    llflgahfvwafslmflfsgrgywqeliesivwahnklkvapaiqpralsivqgravgva
    hyllggiattwafflariisvg
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6l35B (B:)
    asrfpkfsrglsqdpttrriwfgiatahdfeshddmteerlyqkifashfgqlaiiflwt
    sgnlfhvawqgnfeawgqdplhvrpiahaiwdphfgqpaveaftrggasgpvniaysgvy
    qwwytiglrtnqdlyggsifllfvsalfliagwlhlqpkwkpsvswfknaesrlnhhlsg
    lfgvsslawtghlvhvaipesrgehvrwnnlltalphpqglgpffagqwnvyaqnpdsns
    hlfgtsegagtailtflggfhpqtqslwltdmahhhlaiavifiiaghmyrtnfgighsm
    keileahtppggrlgrghkglydtinnslhfqlglalaslgvitslvaqhmyslppyafl
    aqdfttqaalythhqyiagfimtgafahgaiffirdynpeqnkdnvlarmlehkeaiish
    lswaslflgfhtlglyvhndvmlafgtpekqiliepvfaqwiqsahgkalygfdvllssa
    dspafnagqtlwlpgwldainnnsnslfltigpgdflvhhaialglhtttlilvkgalda
    rgsklmpdkkefgysfpcdgpgrggtcdisawdafylavfwmlntigwvtfywhwkhitl
    wqgnvaqfnesstylmgwlrdylwlnssqlingynpfgmnslsvwawmflfghlvwatgf
    mfliswrgywqelietlawahertplanlvrwkdkpvalsivqarlvglahfsvgyifty
    aafliastsgkfg
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6l35C (C:)
    ahsvkiydtcigctqcvracptdvlemvpwdgckasqiasaprtedcvgckrcesacptd
    flsvrvylgaettrsmglay
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6l35D (D:)
    tpptlnadtpapifggstggllrkaqveefyvitwespkeqifemptggaaimrsgpnll
    klarkeqclalgarlrtkfkiqyqfyrvfpngevqylhpkdgvypekvnagrspvgvnnr
    sigknanpaelkfahkqaydl
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6l35E (E:)
    gpkrgsivkvlrresywfndtgkvvavdqapgvrypvvvrfdkvnyagvstnnyspdele
    aa
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6l35F (F:)
    dvagltpckeskgfakrekqeikklesrlklyapdsapalalnatiektkrrfafygneg
    llcgtdglphlivdgdqahlgefvypglvflyiagwigwvgraylidvrtskkptekeii
    idvplalrimskgltwpvaaigelrsgklveksanitvs
    

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6l35G (G:)
    eantaltitlstgallflgrfvflpfqrdnvsrqglpvqngvthfdagdsraqevtsflk
    tndpagftivdvlawgalghavgffilatinngynpqf
    

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6l35H (H:)
    svyfdlgeidnttgnwdlygnddpnryngfqnkffetfagaftkrglllkflvlggatti
    gylgstsspdllaikngpkqvpvmgprgrk
    

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >6l35I (I:)
    mtasylpsifvpliglvfpaitmaslfiyieqde
    

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >6l35J (J:)
    mqdvktylstapvlatlwfgflagllieinrffpdalvlpl
    

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >6l35K (K:)
    yigsstnlimvasttlmlfagrfglapsanrkstaglklvdrdsglqtgdpagftatdtl
    acgalghvigvgivlglka
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6l35L (L:)
    kyqvieplngdpfiggfetpvtsspliawylsnlpayrtavapllrgveiglahgyllvg
    pfvltgplrnsavrgeagslaaaglvtiltmcltiygiasfkegepskapsltltgrqkd
    adklqtaegwasftggwffgglsgvawayillyvlnlpy
    

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records:
    >6l35M (M:)
    sisdsqiivalvsafitgilalrlgksly