PDB entry 6l2t

View 6l2t on RCSB PDB site
Description: african swine fever virus major capsid protein p72
Deposited on 2019-10-06, released 2020-03-04
The last revision was dated 2020-03-04, with a file datestamp of 2020-02-28.
Experiment type: EM
Resolution: 4.1 Å
R-factor: N/A
AEROSPACI score: 0.02 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: B646L,Major capsid protein
    Species: African swine fever virus [TaxId:10497]
    Database cross-references and differences (RAF-indexed):
    • PDB 6L2T
  • Chain 'B':
    Compound: B646L,Major capsid protein
    Species: African swine fever virus [TaxId:10497]
    Database cross-references and differences (RAF-indexed):
    • PDB 6L2T
  • Chain 'C':
    Compound: B646L,Major capsid protein
    Species: African swine fever virus [TaxId:10497]
    Database cross-references and differences (RAF-indexed):
    • PDB 6L2T (0-End)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6l2tA (A:)
masggafcliandgkadkiilaqdllnsrisniknvnksygkpdpeptlsqieethlvhf
nahfkpyvpvgfeynkvrphtgtptlgnkltfgipqygdffhdmvghhilgachsswqda
piqgtsqmgahgqlqtfprngydwdnqtplegavytlvdpfgrpivpgtknayrnlvyyc
eypglrlyenvrfevngnsldeyssdvttlvrkfcipgdkmtgykhlvgqevsvegtsgp
llcnihdlhkphqskpiltdendtqrtcshtnpkflsqhfphfpeniqtagkqditpitd
atyldirrnvhyscngpqtpkyyqpplalwiklrfwfndnvnlaipsvsipfgerfitik
lasqkdlvnefpglfvrqstviagrpsrrnirfkpwfipgvineisltnnelyinnlfvt
peihnlyvkrvrfslirvhktqvthtnnnhhdeklmsalkwpieymfiglkptwnisdqn
phqhrdwhkfghvvnaimqpthhaeisfqdrdtalpdacssisdispvtypitlpiikni
svtahginlidkfpsqfcssyipfhyggnaiktpddpgammitfalypreeyqpsghinv
srarefyiswdsdyvgsittadlvvsssainflllqngsavlryst

    Sequence, based on observed residues (ATOM records):
    >6l2tA (A:)
cliandgkadkiilaqdllnsrisniknvnksygkpdpeptlsqieethlvhfnahfkpy
vpvgfeynkvrphtgtptlgnkltfgipqygdffhdmvghhilgachsswqdapiqgtsq
mgahgqlqtfprngydwdnqtplegavytlvdpfgrpivpgtknayrnlvyyceypglrl
yenvrfevngnsldeyssdvttlvrkfcipgdkmtgykhlvgqevsvegtsgpllcnihd
lhkphqskpiltdendtqrtcshtnpkflsqhfphfpeniqtagkqditpitdatyldir
rnvhyscngpqtpkyyqpplalwiklrfwfndnvnaipsvsipfgerfitiklasqkdlv
nefpglfvrqstviagrpsrrnirfkpwfipgvineisltnnelyinnlfvtpeihnlyv
krvrfslirvhktqvthtnnnhhdeklmsalkwpieymfiglkptwnisdqnphqhrdwh
kfghvvnaimqpthhaeisfqdrdtalpdacssisdispvtypitlpiiknisvtahgin
lidkfpsqfcssyipfhyggnaiktpddpgammitfalypreeyqpsghinvsrarefyi
swdsdyvgsittadlvvsssainflllq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6l2tB (B:)
masggafcliandgkadkiilaqdllnsrisniknvnksygkpdpeptlsqieethlvhf
nahfkpyvpvgfeynkvrphtgtptlgnkltfgipqygdffhdmvghhilgachsswqda
piqgtsqmgahgqlqtfprngydwdnqtplegavytlvdpfgrpivpgtknayrnlvyyc
eypglrlyenvrfevngnsldeyssdvttlvrkfcipgdkmtgykhlvgqevsvegtsgp
llcnihdlhkphqskpiltdendtqrtcshtnpkflsqhfphfpeniqtagkqditpitd
atyldirrnvhyscngpqtpkyyqpplalwiklrfwfndnvnlaipsvsipfgerfitik
lasqkdlvnefpglfvrqstviagrpsrrnirfkpwfipgvineisltnnelyinnlfvt
peihnlyvkrvrfslirvhktqvthtnnnhhdeklmsalkwpieymfiglkptwnisdqn
phqhrdwhkfghvvnaimqpthhaeisfqdrdtalpdacssisdispvtypitlpiikni
svtahginlidkfpsqfcssyipfhyggnaiktpddpgammitfalypreeyqpsghinv
srarefyiswdsdyvgsittadlvvsssainflllqngsavlryst

    Sequence, based on observed residues (ATOM records):
    >6l2tB (B:)
cliandgkadkiilaqdllnsrisniknvnksygkpdpeptlsqieethlvhfnahfkpy
vpvgfeynkvrphtgtptlgnkltfgipqygdffhdmvghhilgachsswqdapiqgtsq
mgahgqlqtfprngydwdnqtplegavytlvdpfgrpivpgtknayrnlvyyceypglrl
yenvrfevngnsldeyssdvttlvrkfcipgdkmtgykhlvgqevsvegtsgpllcnihd
lhkphqskpiltdendtqrtcshtnpkflsqhfphfpeniqtagkqditpitdatyldir
rnvhyscngpqtpkyyqpplalwiklrfwfndnvnaipsvsipfgerfitiklasqkdlv
nefpglfvrqstviagrpsrrnirfkpwfipgvineisltnnelyinnlfvtpeihnlyv
krvrfslirvhktqvthtnnnhhdeklmsalkwpieymfiglkptwnisdqnphqhrdwh
kfghvvnaimqpthhaeisfqdrdtalpdacssisdispvtypitlpiiknisvtahgin
lidkfpsqfcssyipfhyggnaiktpddpgammitfalypreeyqpsghinvsrarefyi
swdsdyvgsittadlvvsssainflllq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6l2tC (C:)
masggafcliandgkadkiilaqdllnsrisniknvnksygkpdpeptlsqieethlvhf
nahfkpyvpvgfeynkvrphtgtptlgnkltfgipqygdffhdmvghhilgachsswqda
piqgtsqmgahgqlqtfprngydwdnqtplegavytlvdpfgrpivpgtknayrnlvyyc
eypglrlyenvrfevngnsldeyssdvttlvrkfcipgdkmtgykhlvgqevsvegtsgp
llcnihdlhkphqskpiltdendtqrtcshtnpkflsqhfphfpeniqtagkqditpitd
atyldirrnvhyscngpqtpkyyqpplalwiklrfwfndnvnlaipsvsipfgerfitik
lasqkdlvnefpglfvrqstviagrpsrrnirfkpwfipgvineisltnnelyinnlfvt
peihnlyvkrvrfslirvhktqvthtnnnhhdeklmsalkwpieymfiglkptwnisdqn
phqhrdwhkfghvvnaimqpthhaeisfqdrdtalpdacssisdispvtypitlpiikni
svtahginlidkfpsqfcssyipfhyggnaiktpddpgammitfalypreeyqpsghinv
srarefyiswdsdyvgsittadlvvsssainflllqngsavlryst

    Sequence, based on observed residues (ATOM records):
    >6l2tC (C:)
masggafcliandgkadkiilaqdllnsrisniknvnksygkpdpeptlsqieethlvhf
nahfkpyvpvgfeynkvrphtgtptlgnkltfgipqygdffhdmvghhilgachsswqda
piqgtsqmgahgqlqtfprngydwdnqtplegavytlvpfgrpivpgtknayrnlvyyce
ypglrlyenvrfevngnsldeyssdvttlvrkfcipgdkmtgykhlvgqevsvegtsgpl
lcnihdlhkphqskpiltdendtqrtcshtnpkflsqhfphpeniqtagkqditpitdat
yldirrnvhyscngpqtpkyyqpplalwiklrfwfndnvlaipsvsipfgerfitiklas
qkdlvnefpglfvrqstviagrpsrrnirfkpwfipgvineisltnnelyinnlfvtpei
hnlyvkrvrfslirvhktqvthtnnnhhdeklmsalkwpieymfiglkptwnisdqnphq
hrdwhkfghvvnaimqpthhaeisfqdrdtalpdacssisdispvtypitlpiiknisvt
ahginlidkfpsqfcssyipfhyggnaiktpddpgammitfalypreeyqpsghinvsra
refyiswdsdyvgsittadlvvsssainflllq