PDB entry 6kv3

View 6kv3 on RCSB PDB site
Description: Crystal Structure of NAD+ Synthetase from Staphylococcus aureus
Class: ligase
Keywords: Staphylococcus aureus, NAD synthetase Nucleotide-binding protein, NAD pathway, Ligase
Deposited on 2019-09-03, released 2020-09-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-11-11, with a file datestamp of 2020-11-06.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nh(3)-dependent nad(+) synthetase
    Species: Staphylococcus aureus (strain COL) [TaxId:93062]
    Gene: nadE, SACOL1974
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kv3a_
  • Chain 'B':
    Compound: nh(3)-dependent nad(+) synthetase
    Species: Staphylococcus aureus (strain COL) [TaxId:93062]
    Gene: nadE, SACOL1974
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kv3b_
  • Chain 'C':
    Compound: nh(3)-dependent nad(+) synthetase
    Species: Staphylococcus aureus (strain COL) [TaxId:93062]
    Gene: nadE, SACOL1974
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kv3c_
  • Chain 'D':
    Compound: nh(3)-dependent nad(+) synthetase
    Species: Staphylococcus aureus (strain COL) [TaxId:93062]
    Gene: nadE, SACOL1974
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kv3d_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6kv3A (A:)
msklqdvivqemkvkkridsaeeimelkqfiknyvqshsfikslvlgisggqdstlvgkl
vqmsvnelreegidctfiavklpygvqkdadeveqalrfiepdeivtvnikpavdqsvqs
lkeagivltdfqkgnekarermkvqfsiasnrqgivvgtdhsaenitgfytkygdgaadi
apifglnkrqgrqllaylgapkelyektptadleddkpqlpdedalgvtyeaidnylegk
pvtpeeqkvienhyirnahkrelaytrytwpkslehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6kv3A (A:)
sklqdvivqemkvkkridsaeeimelkqfiknyvqshsfikslvlgisggqdstlvgklv
qmsvnelreegdctfiavklpygvqkdadeveqalrfiepdeivtvnikpavdqsvqslk
eagivltdfqkgnekarermkvqfsiasnrqgivvgtdhsaenitgytkygdgaadiapi
fglnkrqgrqllaylgapkelyealgvtyeaidnylegkpvtpeeqkvienhyirnahkr
elaytrytw

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6kv3B (B:)
msklqdvivqemkvkkridsaeeimelkqfiknyvqshsfikslvlgisggqdstlvgkl
vqmsvnelreegidctfiavklpygvqkdadeveqalrfiepdeivtvnikpavdqsvqs
lkeagivltdfqkgnekarermkvqfsiasnrqgivvgtdhsaenitgfytkygdgaadi
apifglnkrqgrqllaylgapkelyektptadleddkpqlpdedalgvtyeaidnylegk
pvtpeeqkvienhyirnahkrelaytrytwpkslehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6kv3B (B:)
sklqdvivqemkvkkridsaeeimelkqfiknyvqshsfikslvlgisggqdstlvgklv
qmsvnelreegidctfiavklpygvqkdadeveqalrfiepdeivtvnikpavdqsvqsl
keagivltdfqkgnekarermkvqfsiasnrqgivvgtdhsaenitgfytkygdgaadia
pifglnkrqgrqllaylgapkeledalgvtyeaidnylegkpvtpeeqkvienhyirnah
krelaytrytwp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6kv3C (C:)
msklqdvivqemkvkkridsaeeimelkqfiknyvqshsfikslvlgisggqdstlvgkl
vqmsvnelreegidctfiavklpygvqkdadeveqalrfiepdeivtvnikpavdqsvqs
lkeagivltdfqkgnekarermkvqfsiasnrqgivvgtdhsaenitgfytkygdgaadi
apifglnkrqgrqllaylgapkelyektptadleddkpqlpdedalgvtyeaidnylegk
pvtpeeqkvienhyirnahkrelaytrytwpkslehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6kv3C (C:)
sklqdvivqemkvkkridsaeeimelkqfiknyvqshsfikslvlgisggqdstlvgklv
qmsvnelreegidctfiavklpygvqdadeveqalrfiepdeivtvnikpavdqsvqslk
eagivltdfqkgnekarermkvqfsiasnrqgivvgtdhsaenitgfytkygdgaadiap
ifglnkrqgrqllaylgapkelylgvtyeaidnylegkpvtpeeqkvienhyirnahkre
laytrytw

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6kv3D (D:)
msklqdvivqemkvkkridsaeeimelkqfiknyvqshsfikslvlgisggqdstlvgkl
vqmsvnelreegidctfiavklpygvqkdadeveqalrfiepdeivtvnikpavdqsvqs
lkeagivltdfqkgnekarermkvqfsiasnrqgivvgtdhsaenitgfytkygdgaadi
apifglnkrqgrqllaylgapkelyektptadleddkpqlpdedalgvtyeaidnylegk
pvtpeeqkvienhyirnahkrelaytrytwpkslehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6kv3D (D:)
klqdvivqemkvkkridsaeeimelkqfiknyvqshsfikslvlgisggqdstlvgklvq
msvnelreegidctfiavklpygvdadeveqalrfiepdeivtvnikpavdqsvqslkea
givltdfqkgnekarermkvqfsiasnrqgivvgtdhsaeniytkygdgaadiapifgln
krqgrqllaylgapkegvtyeaidnylegkpvtpeeqkvienhyirnahkrelaytrytw
pks