PDB entry 6ktm

View 6ktm on RCSB PDB site
Description: the ligand-free structure of human ppargamma ligand-binding domain r288a mutant in the presence of the src-1 coactivator peptide
Deposited on 2019-08-28, released 2020-02-05
The last revision was dated 2020-02-05, with a file datestamp of 2020-01-31.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peroxisome proliferator-activated receptor gamma
    Species: Homo sapiens [TaxId:9606]
    Gene: PPARG, NR1C3
    Database cross-references and differences (RAF-indexed):
    • Uniprot P37231 (Start-282)
      • engineered mutation (93)
  • Chain 'B':
    Compound: 16-mer peptide from Nuclear receptor coactivator 1
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ktmA (A:)
aeissdidqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmns
lmmgedkikfkhitplqeqskevairifqgcqfasveavqeiteyaksipgfvnldlndq
vtllkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkf
nalelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfak
llqkmtdlrqivtehvqllqvikktetdmslhpllqeiykdly

    Sequence, based on observed residues (ATOM records):
    >6ktmA (A:)
npesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkike
vairifqgcqfasveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnk
dgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgd
rpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvi
kktetdmslhpllqeiykdly

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ktmB (B:)
erhkilhrllqegsps

    Sequence, based on observed residues (ATOM records):
    >6ktmB (B:)
hkilhrllqe