PDB entry 6ksy

View 6ksy on RCSB PDB site
Description: crystal structure of arginase from zymomonas mobilis zm4
Deposited on 2019-08-26, released 2020-08-05
The last revision was dated 2020-08-05, with a file datestamp of 2020-07-31.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Arginase/agmatinase/formiminoglutamase
    Species: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) [TaxId:264203]
    Gene: rocF, ZMO0432, ZMO1_ZMO0432
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Arginase/agmatinase/formiminoglutamase
    Species: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) [TaxId:264203]
    Gene: rocF, ZMO0432, ZMO1_ZMO0432
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Arginase/agmatinase/formiminoglutamase
    Species: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) [TaxId:264203]
    Gene: rocF, ZMO0432, ZMO1_ZMO0432
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Arginase/agmatinase/formiminoglutamase
    Species: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) [TaxId:264203]
    Gene: rocF, ZMO0432, ZMO1_ZMO0432
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ksyA (A:)
mssinkplrlifpqwqggdnppyylgsqllawlspdpkgaveevpvpkptgeplqeengi
vgrsilidqlsearqliekhtpdslvvlggdclvslapfswllekykdklgilwidshpd
vqtpkeyknahahvlgelmgngdsdftrtvkhpvspqkimiagihdplpyeanfisehki
qtcspeqvrsgaqpvldwiknekieylaihidldvldphnfrsvlfakpgrgqhdfgdva
egklnipdvvklanqaasiskavgltiaehlpwdalnlknmleelpligk

    Sequence, based on observed residues (ATOM records):
    >6ksyA (A:)
nkplrlifpqwqggdnppyylgsqllawlspdpkgaveevpvpkptgeplqeengivgrs
ilidqlsearqliekhtpdslvvlggdclvslapfswllekykdklgilwidshpdvqtp
keyknahahvlgelmgngdsdftrtvkhpvspqkimiagihdplpyeanfisehkiqtcs
peqvrsgaqpvldwiknekieylaihidldvldphnfrsvlfakpgrgqhdfgdvaegkl
nipdvvklanqaasiskavgltiaehlpwdalnlknmleelpligk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ksyB (B:)
mssinkplrlifpqwqggdnppyylgsqllawlspdpkgaveevpvpkptgeplqeengi
vgrsilidqlsearqliekhtpdslvvlggdclvslapfswllekykdklgilwidshpd
vqtpkeyknahahvlgelmgngdsdftrtvkhpvspqkimiagihdplpyeanfisehki
qtcspeqvrsgaqpvldwiknekieylaihidldvldphnfrsvlfakpgrgqhdfgdva
egklnipdvvklanqaasiskavgltiaehlpwdalnlknmleelpligk

    Sequence, based on observed residues (ATOM records):
    >6ksyB (B:)
ssinkplrlifpqwqggdnppyylgsqllawlspdpkgaveevpvpkptgeplqeengiv
grsilidqlsearqliekhtpdslvvlggdclvslapfswllekykdklgilwidshpdv
qtpkeyknahahvlgelmgngdsdftrtvkhpvspqkimiagihdplpyeanfisehkiq
tcspeqvrsgaqpvldwiknekieylaihidldvldphnfrsvlfakpgrgqhdfgdvae
gklnipdvvklanqaasiskavgltiaehlpwdalnlknmleelpligk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ksyC (C:)
mssinkplrlifpqwqggdnppyylgsqllawlspdpkgaveevpvpkptgeplqeengi
vgrsilidqlsearqliekhtpdslvvlggdclvslapfswllekykdklgilwidshpd
vqtpkeyknahahvlgelmgngdsdftrtvkhpvspqkimiagihdplpyeanfisehki
qtcspeqvrsgaqpvldwiknekieylaihidldvldphnfrsvlfakpgrgqhdfgdva
egklnipdvvklanqaasiskavgltiaehlpwdalnlknmleelpligk

    Sequence, based on observed residues (ATOM records):
    >6ksyC (C:)
kplrlifpqwqggdnppyylgsqllawlspdpkgaveevpvpkptgeplqeengivgrsi
lidqlsearqliekhtpdslvvlggdclvslapfswllekykdklgilwidshpdvqtpk
eyknahahvlgelmgngdsdftrtvkhpvspqkimiagihdplpyeanfisehkiqtcsp
eqvrsgaqpvldwiknekieylaihidldvldphnfrsvlfakpgrgqhdfgdvaegkln
ipdvvklanqaasiskavgltiaehlpwdalnlknmleelplig

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ksyD (D:)
mssinkplrlifpqwqggdnppyylgsqllawlspdpkgaveevpvpkptgeplqeengi
vgrsilidqlsearqliekhtpdslvvlggdclvslapfswllekykdklgilwidshpd
vqtpkeyknahahvlgelmgngdsdftrtvkhpvspqkimiagihdplpyeanfisehki
qtcspeqvrsgaqpvldwiknekieylaihidldvldphnfrsvlfakpgrgqhdfgdva
egklnipdvvklanqaasiskavgltiaehlpwdalnlknmleelpligk

    Sequence, based on observed residues (ATOM records):
    >6ksyD (D:)
inkplrlifpqwqggdnppyylgsqllawlspdpkgaveevpvpkptgeplqeengivgr
silidqlsearqliekhtpdslvvlggdclvslapfswllekykdklgilwidshpdvqt
pkeyknahahvlgelmgngdsdftrtvkhpvspqkimiagihdplpyeanfisehkiqtc
speqvrsgaqpvldwiknekieylaihidldvldphnfrsvlfakpgrgqhdfgdvaegk
lnipdvvklanqaasiskavgltiaehlpwdalnlknmleelplig