PDB entry 6kr2

View 6kr2 on RCSB PDB site
Description: crystal structure of dengue virus nonstructural protein ns5 (form 1)
Deposited on 2019-08-20, released 2020-04-01
The last revision was dated 2020-05-20, with a file datestamp of 2020-05-15.
Experiment type: XRAY
Resolution: 3.06 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Genome polyprotein
    Species: DENGUE VIRUS 2 [TaxId:11060]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Genome polyprotein
    Species: DENGUE VIRUS 2 [TaxId:11060]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SAH, ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6kr2A (A:)
mgtgntgetlgekwknrlnalgksefqiykksgiqevdrtlakegikrgetdhhavsrgs
aklrwfvernlvtpegkvvdlgcgrggwsyycgglknvkevkgltkggpgheepipmsty
gwnlvrlqsgvdvfftppekcdtllcdigesspnptveagrtlrvlnlvenwlnnntqfc
ikvlnpympsviekmealqrkyggalvrnplsrnsthemywvsnasgnivssvnmisrml
inrftmrhkkatyepdvdlgsgtrnigiesetpnldiigkriekikqehetswhydqdhp
yktwayhgsyetkqtgsassmvngvvrlltkpwdiipmvtqmamtdttpfgqqrvfkekv
dtrtqepkegtkklmkitaewlwkelgkkktprmctreeftrkvrsnaalgaiftdenkw
ksareavedsgfwelvdkernlhlegkcetcvynmmgkrekklgefgkakgsraiwymwl
garflefealgflnedhwfsrenslsgvegeglhklgyilrdvskkeggamyaddtagwd
tritledlkneemvtnhmegehkklaeaifkltyqnkvvrvqrptprgtvmdiisrrdqr
gsgqvvtyglntftnmeaqlirqmegegvfksiqhltvteeiavknwlvrvgrerlsrma
isgddcvvkplddrfasaltalndmgkvrkdiqqwepsrgwndwtqvpfcshhfhelimk
dgrvlvvpcrnqdeligrarisqgagwslretaclgksyaqmwslmyfhrrdlrlaanai
csavpshwvptsrttwsihathewmttedmltvwnrvwiqenpwmedktpvesweeipyl
gkredqwcgsligltsratwakniqtainqvrsligneeytdympsmkrfrreeeeagvl
wgssshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6kr2A (A:)
tlgekwknrlnalgksefqiykksgiqevdrtlakegikrgetdhhavsrgsaklrwfve
rnlvtpegkvvdlgcgrggwsyycgglknvkevkgltkggpgheepipmstygwnlvrlq
sgvdvfftppekcdtllcdigesspnptveagrtlrvlnlvenwlnnntqfcikvlnpym
psviekmealqrkyggalvrnplsrnsthemywvsnasgnivssvnmisrmlinrftmrh
kkatyepdvdlgsgtrnigiesetpnldiigkriekikqehetswhydqdhpyktwayhg
syetkqtgsassmvngvvrlltkpwdiipmvtqmamtdttpfgqqrvfkekvdtrtqepk
egtkklmkitaewlwkelgkkktprmctreeftrkvrsnwksareavedsgfwelvdker
nlhlegkcetcvynmmgkrekklgefgakgsraiwymwlgarflefealgflnedhwfsr
enslsgvegeglhklgyilrdvskkeggamyaddtagwdtritledlkneemvtnhmege
hkklaeaifkltyqnkvvrvqrptprgtvmdiisrrdqrgvtyglntftnmeaqlirqme
gegvfksiqhltvteeiavknwlvrvgrerlsrmaisgddcvvkplddrfasaltalndm
gkvrkdiqqwepsrgwndwtqvpfcshhfhelimkdgrvlvvpcrnqdeligrarisqsl
retaclgksyaqmwslmyfhrrdlrlaanaicsavpshwvptsrttwsihathewmtted
mltvwnrvwiqenpwmedktpvesweeipylgkredqwcgsligltsratwakniqtain
qvrsligneeytdymps

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6kr2B (B:)
mgtgntgetlgekwknrlnalgksefqiykksgiqevdrtlakegikrgetdhhavsrgs
aklrwfvernlvtpegkvvdlgcgrggwsyycgglknvkevkgltkggpgheepipmsty
gwnlvrlqsgvdvfftppekcdtllcdigesspnptveagrtlrvlnlvenwlnnntqfc
ikvlnpympsviekmealqrkyggalvrnplsrnsthemywvsnasgnivssvnmisrml
inrftmrhkkatyepdvdlgsgtrnigiesetpnldiigkriekikqehetswhydqdhp
yktwayhgsyetkqtgsassmvngvvrlltkpwdiipmvtqmamtdttpfgqqrvfkekv
dtrtqepkegtkklmkitaewlwkelgkkktprmctreeftrkvrsnaalgaiftdenkw
ksareavedsgfwelvdkernlhlegkcetcvynmmgkrekklgefgkakgsraiwymwl
garflefealgflnedhwfsrenslsgvegeglhklgyilrdvskkeggamyaddtagwd
tritledlkneemvtnhmegehkklaeaifkltyqnkvvrvqrptprgtvmdiisrrdqr
gsgqvvtyglntftnmeaqlirqmegegvfksiqhltvteeiavknwlvrvgrerlsrma
isgddcvvkplddrfasaltalndmgkvrkdiqqwepsrgwndwtqvpfcshhfhelimk
dgrvlvvpcrnqdeligrarisqgagwslretaclgksyaqmwslmyfhrrdlrlaanai
csavpshwvptsrttwsihathewmttedmltvwnrvwiqenpwmedktpvesweeipyl
gkredqwcgsligltsratwakniqtainqvrsligneeytdympsmkrfrreeeeagvl
wgssshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6kr2B (B:)
tlgekwknrlnalgksefqiykksgiqevdrtlakegikrgetdhhavsrgsaklrwfve
rnlvtpegkvvdlgcgrggwsyycgglknvkevkgltkggpgheepipmstygwnlvrlq
sgvdvfftppekcdtllcdigesspnptveagrtlrvlnlvenwlnnntqfcikvlnpym
psviekmealqrkyggalvrnplsrnsthemywvsnasgnivssvnmisrmlinrftmrh
kkatyepdvdlgsgtrnigiesetpnldiigkriekikqehetswhydqdhpyktwayhg
syetkqtgsassmvngvvrlltkpwdiipmvtqmamtdttpfgqqrvfkekvdtrtqepk
egtkklmkitaewlwkelgkkktprmctreeftrkvrsnsareavedsgfwelvdkernl
hlegkcetcvynmrekklgefgkaiwymwlgarflefealgflnedhwfsrenslsgveg
eglhklgyilrdvskkeggamyaddtagwdtritledlkneemvtnhmegehkklaeaif
kltyqnkvvrvqrptprgtvmdiisrrdqrgvtyglntftnmeaqlirqmegegvfksiq
hltvteeiavknwlvrvgrerlsrmaisgddcvvkplddrfasaltalndmgkvrkdiqq
wepsrgwndwtqvpfcshhfhelimkdgrvlvvpcrnqdeligrarisqslretaclgks
yaqmwslmyfhrrdlrlaanaicsavpshwvptsrtthathewmttedmltvwnrvwiqe
npwmedktpvesweeipylgkredqwcgsligltsratwakniqtainqvrsligneeyt
dym