PDB entry 6kp0

View 6kp0 on RCSB PDB site
Description: crystal structure of two domain m1 zinc metallopeptidase e323a mutant bound to l-arginine
Deposited on 2019-08-13, released 2020-01-22
The last revision was dated 2020-02-05, with a file datestamp of 2020-01-31.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Zinc metalloprotease, putative
    Species: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) [TaxId:243230]
    Gene: DR_0875
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9RVZ5 (37-End)
      • engineered mutation (324)
  • Chain 'B':
    Compound: Zinc metalloprotease, putative
    Species: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) [TaxId:243230]
    Gene: DR_0875
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9RVZ5 (37-End)
      • engineered mutation (324)
  • Heterogens: ARG, ZN, NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6kp0A (A:)
maswshpqfekgsshhhhhhssgsgggggenlyfqgsqsvgdsifpslgqrgldvqhydl
hltvprpgephlsgdvtltvgareplsrivldllgprvsaaqwngqrvrwvqtaqkvevt
lprplrpgetgrlrliyagtpelsgdpglpirpgwqneaglsyslsephgtrgflpcndh
psdpatftvrvtvpasasaaasglfttqternglktltftqrvpvptyalglivgplerr
tapdvqlgtqtvhrrdiyaaglpagttvpegetarmlrvlsdwfgpypdevygvallpvr
qlaletaglttmpatsnrervrlhalahqwfgdqvtladwadtwlsegfatyaellwaes
qgedgqamaadwyarlsvlpsrplratreeeifdasayfrgalalhalrlkvgdaafgqf
lhsyvktftgrpvsttalltlvktqlgaeaeqtlrvwvegrtlpplpepvgapv

    Sequence, based on observed residues (ATOM records):
    >6kp0A (A:)
qsvgdsifpslgqrgldvqhydlhltvprpgephlsgdvtltvgareplsrivldllgpr
vsaaqwngqrvrwvqtaqkvevtlprplrpgetgrlrliyagtpelsgdplpirpgwqne
aglsyslsephgtrgflpcndhpsdpatftvrvtvpasasaaasglfttqternglktlt
ftqrvpvptyalglivgplerrtapdvqlgtqtvhrrdiyaaglpagttvpegetarmlr
vlsdwfgpypdevygvallpvrqlaletaglttmpatsnrervrlhalahqwfgdqvtla
dwadtwlsegfatyaellwaesqgedgqamaadwyarlsvlpsrplratreeeifdasay
frgalalhalrlkvgdaafgqflhsyvktftgrpvsttalltlvktqlgaeaeqtlrvwv
egrtlpplpepv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6kp0B (B:)
maswshpqfekgsshhhhhhssgsgggggenlyfqgsqsvgdsifpslgqrgldvqhydl
hltvprpgephlsgdvtltvgareplsrivldllgprvsaaqwngqrvrwvqtaqkvevt
lprplrpgetgrlrliyagtpelsgdpglpirpgwqneaglsyslsephgtrgflpcndh
psdpatftvrvtvpasasaaasglfttqternglktltftqrvpvptyalglivgplerr
tapdvqlgtqtvhrrdiyaaglpagttvpegetarmlrvlsdwfgpypdevygvallpvr
qlaletaglttmpatsnrervrlhalahqwfgdqvtladwadtwlsegfatyaellwaes
qgedgqamaadwyarlsvlpsrplratreeeifdasayfrgalalhalrlkvgdaafgqf
lhsyvktftgrpvsttalltlvktqlgaeaeqtlrvwvegrtlpplpepvgapv

    Sequence, based on observed residues (ATOM records):
    >6kp0B (B:)
qsvgdsifpslgqrgldvqhydlhltvprpgephlsgdvtltvgareplsrivldllgpr
vsaaqwngqrvrwvqtaqkvevtlprplrpgetgrlrliyagtpelsgdpglpirpgwqn
eaglsyslsephgtrgflpcndhpsdpatftvrvtvpasasaaasglfttqternglktl
tftqrvpvptyalglivgplerrtapdvqlgtqtvhrrdiyaaglpagttvpegetarml
rvlsdwfgpypdevygvallpvrqlaletaglttmpatsnrervrlhalahqwfgdqvtl
adwadtwlsegfatyaellwaesqgedgqamaadwyarlsvlpsrplratreeeifdasa
yfrgalalhalrlkvgdaafgqflhsyvktftgrpvsttalltlvktqlgaeaeqtlrvw
vegrtlpplpepv